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13_1_40cm_2_scaffold_230

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_230_1
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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136..1209
DNA (1074bp) protein (358aa)
cas; CRISPR-associated endonuclease Cas1 (EC:3.1.-.-) rbh
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilacea
CRISPR-associated protein Cas1 n=1 Tax=Nitrosopumilus sp. AR RepID=UPI00037CA3E1
13_1_40cm_2_scaffold_230_2
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1148..1849)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BBR3_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS82567.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_2_scaffold_230_3
unknown

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1945..3069
DNA (1125bp) protein (375aa)

This feature has no annotations

13_1_40cm_2_scaffold_230_4
Streptococcus salivarius, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3348..4520)
DNA (1173bp) protein (391aa)
KAP P-loop domain protein n=1 Tax=Methylotenera sp. (strain 301) RepID=D7DM09_METS0
KAP family P-loop domain protein {ECO:0000313|EMBL:KJU90211.1}; TaxID=1304 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus salivarius.
KAP P-loop domain-containing protein
13_1_40cm_2_scaffold_230_5
unknown

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4636..5217
DNA (582bp) protein (194aa)

This feature has no annotations

13_1_40cm_2_scaffold_230_6
unknown

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comp(5223..5756)
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_40cm_2_scaffold_230_7
unknown

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5883..6134
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_2_scaffold_230_8
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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6214..6468
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BE55_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJW71056.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
13_1_40cm_2_scaffold_230_9
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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6819..8603
DNA (1785bp) protein (595aa)
Type B DNA polymerase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B3K3_9ARCH rbh
type B DNA polymerase
Type B DNA polymerase {ECO:0000313|EMBL:AFS80673.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensis
13_1_40cm_2_scaffold_230_10

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8868..9089
DNA (222bp) protein (74aa)
Marine sediment metagenome DNA, contig: S01H4_C01199 {ECO:0000313|EMBL:GAG64307.1}; Marine sediment metagenome DNA, contig: S03H2_C00183 {ECO:0000313|EMBL:GAH28505.1}; TaxID=412755 species="unclassifi
13_1_40cm_2_scaffold_230_11
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(9267..11138)
DNA (1872bp) protein (624aa)
YVTN family beta-propeller repeat protein
YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:AIF82756.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sourc
40-residue YVTN family beta-propeller repeat protein id=2349871 bin=GWA2_Planctomycete_KSU_39_15 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
13_1_40cm_2_scaffold_230_12
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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12676..12888
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR94_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05251.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_2_scaffold_230_13
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12891..13853)
DNA (963bp) protein (321aa)
Glyoxylate reductase n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B7X4_9ARCH
glyoxylate reductase
Glyoxylate reductase {ECO:0000313|EMBL:AFS82238.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.;"
13_1_40cm_2_scaffold_230_14
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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14128..16038
DNA (1911bp) protein (637aa)
2:oxoacid-ferredoxin oxidoreductase, fused alpha and gamma subunit (EC:1.2.7.3)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein id=14427098 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_230_15
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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16028..16993
DNA (966bp) protein (322aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta id=14427097 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta Tax=CSP1_1_Thaumarchaeota
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
13_1_40cm_2_scaffold_230_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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17054..17509
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AR99_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05256.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_2_scaffold_230_17
Candidatus Nitrosopumilus sp. NF5, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17502..18035)
DNA (534bp) protein (178aa)
hypothetical protein
hypothetical protein id=14427095 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
Uncharacterized protein {ECO:0000313|EMBL:AJW71437.1}; TaxID=1580092 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. NF5.
13_1_40cm_2_scaffold_230_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(18071..18625)
DNA (555bp) protein (185aa)
hypothetical protein id=14427091 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_230_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(18666..19436)
DNA (771bp) protein (257aa)
hypothetical protein id=14427090 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_230_20
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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19506..20096
DNA (591bp) protein (197aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate is
leuC; 3-isopropylmalate dehydratase large subunit 1 (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CV36_9ARCH
Displaying 20 items

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