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13_1_40cm_2_scaffold_4461

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_4461_1
unknown

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2..223
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_2_scaffold_4461_2

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405..1040
DNA (636bp) protein (212aa)
Putative Snf7 domain-containing protein {ECO:0000313|EMBL:AKC94871.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein id=14428134 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
cdcB; putative SNF7 protein
13_1_40cm_2_scaffold_4461_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(1037..2305)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ARU8_9ARCH rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI05387.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
major facilitator superfamily MFS
13_1_40cm_2_scaffold_4461_4
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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2707..3069
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E476_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA05543.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
13_1_40cm_2_scaffold_4461_5
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3066..3683)
DNA (618bp) protein (206aa)
hypothetical protein id=14428135 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_4461_6
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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3859..4203
DNA (345bp) protein (115aa)
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein id=14428523 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein
13_1_40cm_2_scaffold_4461_7
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(4244..4549)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AUS4_9ARCH
putative RNA-binding protein, contains TRAM domain
Putative RNA-binding protein, contains TRAM domain {ECO:0000313|EMBL:AIF83749.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
13_1_40cm_2_scaffold_4461_8
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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4750..5037
DNA (288bp) protein (96aa)
hypothetical protein id=14428136 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_4461_9
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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5041..6231
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVG9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06592.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_2_scaffold_4461_10
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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6228..7370
DNA (1143bp) protein (381aa)
hypothetical protein id=14428138 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_4461_11
unknown

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comp(7352..7561)
DNA (210bp) protein (70aa)

This feature has no annotations

13_1_40cm_2_scaffold_4461_12
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(7640..9961)
DNA (2322bp) protein (774aa)
Cell surface protein {ECO:0000313|EMBL:KJU84628.1}; Flags: Fragment;; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magne
hypothetical protein
NHL repeat containing protein id=5802062 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
13_1_40cm_2_scaffold_4461_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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10083..10811
DNA (729bp) protein (243aa)
radical SAM protein Tax=CSP1_1_Thaumarchaeota
radical SAM protein id=14428140 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
radical SAM protein
13_1_40cm_2_scaffold_4461_14
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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10811..11371
DNA (561bp) protein (187aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1407055 species="Archaea; Thaumarc
folE; GTP cyclohydrolase 1 (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVK6_9ARCH
13_1_40cm_2_scaffold_4461_15

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11410..11664
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 RepID=I3D4V4_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKM23048.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_2_scaffold_4461_16
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(11653..12333)
DNA (681bp) protein (227aa)
ExsB family protein; K06920 queuosine biosynthesis protein QueC id=14428143 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
ExsB family protein; K06920 queuosine biosynthesis protein QueC Tax=CSP1_1_Thaumarchaeota
ExsB family protein
13_1_40cm_2_scaffold_4461_17
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

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comp(12303..13130)
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Chlorella variabilis RepID=E1ZII5_CHLVA
glucose transporter GlcU Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
hypothetical protein
13_1_40cm_2_scaffold_4461_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(13155..14072)
DNA (918bp) protein (306aa)
homoserine kinase id=14428144 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
homoserine kinase Tax=CSP1_1_Thaumarchaeota
homoserine kinase
13_1_40cm_2_scaffold_4461_19
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(14072..14830)
DNA (759bp) protein (253aa)
GTPase id=14428145 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
GTPase Tax=CSP1_1_Thaumarchaeota
GTPase
13_1_40cm_2_scaffold_4461_20
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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14888..15904
DNA (1017bp) protein (339aa)
Putative membrane protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E8C5_9ARCH rbh
Putative membrane protein {ECO:0000313|EMBL:EPA05661.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarc
conserved membrane protein of unknown function
13_1_40cm_2_scaffold_4461_21

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15940..16740
DNA (801bp) protein (267aa)
Ketoacyl reductase HetN protein {ECO:0000313|EMBL:KEQ57368.1}; EC=1.1.-.- {ECO:0000313|EMBL:KEQ57368.1};; TaxID=1502293 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;"
Short-chain dehydrogenase/reductase SDR n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0BBP0_9ARCH rbh
short-chain dehydrogenase/reductase SDR
13_1_40cm_2_scaffold_4461_22
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(16747..17139)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AVD7_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI06580.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
hypothetical protein
13_1_40cm_2_scaffold_4461_23
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17161..17391)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUZ8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGP94702.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarch
hypothetical protein
13_1_40cm_2_scaffold_4461_24
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17528..18415)
DNA (888bp) protein (296aa)
Glycosyltransferase 28 domain protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUZ9_9ARCH
Glycosyltransferase 28 domain protein {ECO:0000313|EMBL:EGP94703.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidat
hypothetical protein
Displaying 24 items

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