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13_1_40cm_2_scaffold_1616

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1616_1
Candidatus Nitrosopumilus sp. D3C, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3..440)
DNA (438bp) protein (146aa)
tpiA; Triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000313|EMBL:AJM92426.1}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000313|EMBL:AJ
Triosephosphate isomerase n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B4A5_9ARCH
13_1_40cm_2_scaffold_1616_2

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comp(534..701)
DNA (168bp) protein (56aa)
Putative ribosomal L40e family protein n=2 Tax=environmental samples RepID=B3T7F5_9ARCH
Ribosomal protein L40e (RP-L40e, RPL40) {ECO:0000313|EMBL:AIF04615.1}; TaxID=1456055 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_175_E11.;"
ribosomal protein L40E
13_1_40cm_2_scaffold_1616_3
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(724..1644)
DNA (921bp) protein (307aa)
sucD; succinate--CoA ligase subunit alpha (EC:6.2.1.5)
CoA-binding domain-containing protein id=14427853 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
CoA-binding domain-containing protein Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_1616_4
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(1637..2749)
DNA (1113bp) protein (371aa)
sucC; succinate-CoA ligase, beta subunit (EC:6.2.1.-)
succinate--CoA ligase id=14427852 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
succinate--CoA ligase Tax=CSP1_1_Thaumarchaeota
13_1_40cm_2_scaffold_1616_5
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(3405..4508)
DNA (1104bp) protein (368aa)
Putative Histidine kinase {ECO:0000313|EMBL:CDI05323.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDI05323.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeo
Putative Histidine kinase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASB6_9ARCH
integral membrane sensor signal transduction histidine kinase
13_1_40cm_2_scaffold_1616_6
uncultured marine crenarchaeote HF4000_APKG5N21, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4617..4943)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=2 Tax=environmental samples RepID=B3T7F2_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:ABZ08946.1}; TaxID=455593 species="Archaea; Thaumarchaeota; Nitrosopumilales; environmental samples.;" source="uncultured marine crenarchaeote HF4000
hypothetical protein
13_1_40cm_2_scaffold_1616_7
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(4988..8182)
DNA (3195bp) protein (1065aa)
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] id=14427850 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
isoleucyl-tRNA synthetase; K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=CSP1_1_Thaumarchaeota
Isoleucyl-tRNA synthetase
13_1_40cm_2_scaffold_1616_8
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(8243..9418)
DNA (1176bp) protein (392aa)
Transcriptional regulator, TrmB n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATT7_9ARCH
Transcriptional regulator, TrmB {ECO:0000313|EMBL:CDI05853.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
transcriptional regulator TrmB
13_1_40cm_2_scaffold_1616_9
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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9576..10139
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EA79_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EGG42329.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
13_1_40cm_2_scaffold_1616_10
Nitrosopumilus maritimus, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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10149..10703
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A4K7_NITMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX12985.1}; TaxID=436308 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Nitrosopumilus maritimus (strain SC
13_1_40cm_2_scaffold_1616_11
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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10715..11899
DNA (1185bp) protein (395aa)
AAA ATPase central domain protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATJ4_9ARCH rbh
AAA ATPase central domain protein {ECO:0000313|EMBL:CDI05850.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
cdcC; AAA-type ATPase domain-containing putative archaeal cell division protein
13_1_40cm_2_scaffold_1616_12
unknown

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12005..12073
DNA (69bp) protein (23aa)

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Displaying 12 items

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