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13_1_40cm_2_scaffold_1991

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_1991_1
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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14..1123
DNA (1110bp) protein (370aa)
acetyl-/propanoyl CoA C-acetyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KIY6_9ARCH rbh
Propanoyl-CoA C-acyltransferase {ECO:0000313|EMBL:EGG42628.1}; TaxID=886738 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitr
13_1_40cm_2_scaffold_1991_2

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1237..1443
DNA (207bp) protein (69aa)
Putative nucleic acid binding protein {ECO:0000313|EMBL:AIF13797.1}; TaxID=1456221 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_64_C01.;"
13_1_40cm_2_scaffold_1991_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(1455..2213)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT37_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05886.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
Histidine kinase
13_1_40cm_2_scaffold_1991_4
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(2259..2546)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATA9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:CDI05887.1}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
13_1_40cm_2_scaffold_1991_5
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(2634..3488)
DNA (855bp) protein (285aa)
Transcriptional regulator TrmB n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BEH4_9ARCH
transcriptional regulator TrmB
Transcriptional regulator TrmB {ECO:0000313|EMBL:AFS82756.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus s
13_1_40cm_2_scaffold_1991_6
unknown

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comp(3576..3827)
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_40cm_2_scaffold_1991_7
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(3939..5441)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BBM5_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS82869.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_2_scaffold_1991_8

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5543..6154
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BCU0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKM73810.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_2_scaffold_1991_9
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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6162..6965
DNA (804bp) protein (268aa)
Sensor protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CX49_9ARCH
Sensor protein {ECO:0000313|EMBL:EGP93851.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum kore
hypothetical protein
13_1_40cm_2_scaffold_1991_10
unknown

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7022..7576
DNA (555bp) protein (185aa)

This feature has no annotations

13_1_40cm_2_scaffold_1991_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7616..7948)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAK5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58351.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_2_scaffold_1991_12
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8094..8663
DNA (570bp) protein (190aa)
resolvase, Holliday junction-type id=14428229 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
resolvase, Holliday junction-type Tax=CSP1_1_Thaumarchaeota
resolvase, Holliday junction-type
13_1_40cm_2_scaffold_1991_13
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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8703..9062
DNA (360bp) protein (120aa)
hypothetical protein id=14428228 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon
hypothetical protein Tax=CSP1_1_Thaumarchaeota
hypothetical protein
13_1_40cm_2_scaffold_1991_14

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comp(9042..9953)
DNA (912bp) protein (304aa)
Putative flavin reductase like protein n=1 Tax=uncultured archaeon RepID=I3RKF5_9ARCH
hypothetical protein
Putative flavin reductase like protein {ECO:0000313|EMBL:AFK24815.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
13_1_40cm_2_scaffold_1991_15
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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10027..10371
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2E599_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA04656.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
hypothetical protein
13_1_40cm_2_scaffold_1991_16
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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10678..12009
DNA (1332bp) protein (444aa)
Threonine synthase {ECO:0000313|EMBL:CDI05593.1}; EC=4.2.3.1 {ECO:0000313|EMBL:CDI05593.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archa
thrC; Threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT07_9ARCH
13_1_40cm_2_scaffold_1991_17
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12006..12878)
DNA (873bp) protein (291aa)
Cation diffusion facilitator family transporter n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMU7_NITGG
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:AIF84476.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
13_1_40cm_2_scaffold_1991_18
CSP1_1_Thaumarchaeota, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12960..14009)
DNA (1050bp) protein (350aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59); K00150 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) [EC:1.2.1.59] id=14428223 bin=bin2_Thaum species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Thaumarchaeota tax=bin2_Thaum organism_group=Archaeon rbh
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.59); K00150 glyceraldehyde-3-phosphate dehydrogenase (NAD(P)) [EC:1.2.1.59] Tax=CSP1_1_Thaumarchaeota
putative glyceraldehyde-3-phosphate dehydrogenase, type II
13_1_40cm_2_scaffold_1991_19
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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14084..14785
DNA (702bp) protein (234aa)
DSBA oxidoreductase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWM9_9ARCH
DSBA oxidoreductase {ECO:0000313|EMBL:EGP93681.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum
DSBA oxidoreductase
13_1_40cm_2_scaffold_1991_20
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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14889..16283
DNA (1395bp) protein (465aa)
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:CDI05587.1}; EC=2.3.3.10 {ECO:0000313|EMBL:CDI05587.1};; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Tha
Hydroxymethylglutaryl-CoA synthase n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ASG6_9ARCH rbh
hydroxymethylglutaryl-CoA synthase
13_1_40cm_2_scaffold_1991_21
Candidatus Nitrosopelagicus brevis, Candidatus Nitrosopelagicus, Thaumarchaeota, Archaea

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16314..16487
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:AJA92545.1}; TaxID=1410606 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Candidatus Nitrosopelagicus brevis.;"
13_1_40cm_2_scaffold_1991_22
Candidatus Nitrosopumilus koreensis, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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16556..16966
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B6D7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS81034.1}; TaxID=1229908 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus koreensi
13_1_40cm_2_scaffold_1991_23
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(17166..17363)
DNA (198bp) protein (66aa)
RNA polymerase Rbp10 n=2 Tax=Candidatus Nitrosoarchaeum limnia RepID=F3KJQ4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:EPA06650.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarcha
RNA polymerase Rbp10
13_1_40cm_2_scaffold_1991_24
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(17405..17704)
DNA (300bp) protein (100aa)
30S ribosomal protein S10P n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6AT24_9ARCH
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508, ECO:0000256|SAAS:SAAS00243320}; TaxID=1407055 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archae
rpsJ; ribosomal protein S10
13_1_40cm_2_scaffold_1991_25
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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comp(17722..19029)
DNA (1308bp) protein (436aa)
elongation factor 1-alpha (EC:2.7.7.4)
Putative elongation factor 1-alpha n=1 Tax=Thaumarchaeota archaeon N4 RepID=V6ATN5_9ARCH rbh
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
Displaying 25 items

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