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13_1_40cm_3_scaffold_1178

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1178_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(33..1922)
DNA (1890bp) protein (630aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000256|HAMAP-Rule:MF_00588}; Short=Glu-ADT subunit E {ECO:0000256|HAMAP-Rule:MF_00588};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00588};; TaxID=123708
gatE; glutamyl-tRNA(Gln) amidotransferase subunit E (EC:6.3.5.-) rbh
Glutamyl-tRNA(Gln) amidotransferase subunit E n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA3_NITGG rbh
13_1_40cm_3_scaffold_1178_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1968..3176)
DNA (1209bp) protein (403aa)
gatD; glutamyl-tRNA(Gln) amidotransferase subunit D (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|RuleBase:RU004457}; EC=6.3.5.- {ECO:0000256|RuleBase:RU004457};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrosospha
Glutamyl-tRNA(Gln) amidotransferase subunit D n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDH1_NITGG rbh
13_1_40cm_3_scaffold_1178_3
unknown

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4359..4736
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_40cm_3_scaffold_1178_4
unknown

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comp(4933..5214)
DNA (282bp) protein (94aa)

This feature has no annotations

13_1_40cm_3_scaffold_1178_5

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5276..6550
DNA (1275bp) protein (425aa)
Putative RNA methylase {ECO:0000313|EMBL:AHM02030.1}; TaxID=1368239 species="Archaea; Crenarchaeota; miscellaneous Crenarchaeota group; environmental samples.;" source="uncultured miscellaneous Crenar
putative RNA methylase id=4775 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
putative RNA methylase
13_1_40cm_3_scaffold_1178_6
GWC2_Elusimicrobia_61_19_curated, Elusimicrobia, Bacteria

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6547..7158
DNA (612bp) protein (204aa)
Tax=GWC2_Elusimicrobia_61_19_curated
13_1_40cm_3_scaffold_1178_7
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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7970..8908
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAQ7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS82569.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. AR2.
13_1_40cm_3_scaffold_1178_8
unknown

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8909..9250
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_40cm_3_scaffold_1178_9
unknown

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comp(9427..10089)
DNA (663bp) protein (221aa)

This feature has no annotations

13_1_40cm_3_scaffold_1178_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10252..10650)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFW0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57698.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1178_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10684..11205)
DNA (522bp) protein (174aa)
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00243}; EC=2.7.7.1 {ECO:0000256|HAMAP-Rule:MF_00243};; NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00243}; NAD(+) pyrophosp
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA6_NITGG
13_1_40cm_3_scaffold_1178_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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11283..12308
DNA (1026bp) protein (342aa)
rtcA; RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4
RNA 3'-terminal-phosphate cyclase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDH7_NITGG rbh
13_1_40cm_3_scaffold_1178_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(12305..12709)
DNA (405bp) protein (135aa)
Putative copper resistance protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8X2_NITGG
copper resistance protein
Putative copper resistance protein {ECO:0000313|EMBL:AFU57701.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitr
13_1_40cm_3_scaffold_1178_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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12906..13382
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0II92_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57702.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1178_trna_1
unknown

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comp(13386..13478)
DNA (93bp)
transferRNA
13_1_40cm_3_scaffold_1178_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(13513..14073)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFW4_NITGG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57703.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1178_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14074..14403)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57704.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1178_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14456..15823)
DNA (1368bp) protein (456aa)
UbiD family decarboxylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDI0_NITGG rbh
UbiD family decarboxylase
UbiD family decarboxylase {ECO:0000313|EMBL:AFU57705.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaer
13_1_40cm_3_scaffold_1178_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(15810..16172)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I8X5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57706.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1178_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(16680..17729)
DNA (1050bp) protein (350aa)
Diphthamide biosynthesis protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFW9_NITGG rbh
diphthamide biosynthesis protein
Diphthamide biosynthesis protein {ECO:0000313|EMBL:AFU57708.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_3_scaffold_1178_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(18299..19153)
DNA (855bp) protein (285aa)
Putative ATPase, PP-loop superfamily n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMC3_NITGG rbh
ATPase, PP-loop superfamily
Putative ATPase, PP-loop superfamily {ECO:0000313|EMBL:AFU57764.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Ni
13_1_40cm_3_scaffold_1178_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19280..19477
DNA (198bp) protein (66aa)
Putative HTH-type transcriptional regulator, AsnC family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG29_NITGG
HTH-type transcriptional regulator, AsnC family
Putative HTH-type transcriptional regulator, AsnC family {ECO:0000313|EMBL:AFU57763.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrosos
13_1_40cm_3_scaffold_1178_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

19758..19970
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I907_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57761.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1178_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(20256..20654)
DNA (399bp) protein (133aa)
DUF126 domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IIB4_NITGG
hypothetical protein
DUF126 domain-containing protein {ECO:0000313|EMBL:AFU57757.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_3_scaffold_1178_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(20651..21835)
DNA (1185bp) protein (395aa)
Putative aconitase subunit 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I906_NITGG rbh
aconitase subunit 1
Putative aconitase subunit 1 {ECO:0000313|EMBL:AFU57756.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososph
13_1_40cm_3_scaffold_1178_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21887..22543
DNA (657bp) protein (219aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1237085 species=
Endonuclease III n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMC1_NITGG rbh
endonuclease III
13_1_40cm_3_scaffold_1178_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(22521..23210)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IG19_NITGG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57753.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1178_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

23553..24713
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I902_NITGG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57751.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1178_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

24968..25270
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDK1_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57750.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1178_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

25528..28452
DNA (2925bp) protein (975aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMC0_NITGG rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU57749.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
hypothetical protein rbh
Displaying items 1-30 of 35 in total

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