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13_1_40cm_3_scaffold_10190

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_10190_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(181..693)
DNA (513bp) protein (171aa)
Transcription factor E n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IDR9_NITGG rbh
tfe; transcription factor E
Transcription factor E {ECO:0000256|HAMAP-Rule:MF_01909, ECO:0000256|SAAS:SAAS00008967}; Short=TFE {ECO:0000256|HAMAP-Rule:MF_01909};; TFIIE subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01909}; Tr
13_1_40cm_3_scaffold_10190_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(756..1661)
DNA (906bp) protein (302aa)
Putative adenylate cyclase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGM3_NITGG rbh
adenylate cyclase rbh
Putative adenylate cyclase {ECO:0000313|EMBL:AFU56957.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphae
13_1_40cm_3_scaffold_10190_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1755..1937
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I6S2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU56956.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_10190_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1921..2238)
DNA (318bp) protein (106aa)
Putative signal transduction response regulator, receiver domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBL5_NITGG
signal transduction response regulator, receiver domain-containing protein
Putative signal transduction response regulator, receiver domain protein {ECO:0000313|EMBL:AFU56955.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphae
13_1_40cm_3_scaffold_10190_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2504..2890)
DNA (387bp) protein (129aa)
Heme-containing membrane protein CtaA n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL86_NITGG
ctaA; heme-containing membrane protein CtaA
Heme-containing membrane protein CtaA {ECO:0000313|EMBL:AFU56954.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
13_1_40cm_3_scaffold_10190_6
unknown

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comp(3240..3641)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_3_scaffold_10190_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3921..5261
DNA (1341bp) protein (447aa)
polB1; DNA polymerase II small subunit (EC:2.7.7.7)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=1237085 species="Archaea; Thaum
DNA polymerase II small subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGL6_NITGG rbh
13_1_40cm_3_scaffold_10190_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5251..5475)
DNA (225bp) protein (75aa)
ORC1-type DNA replication protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I6R5_NITGG
cdc6; cell division control protein 6
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
13_1_40cm_3_scaffold_10190_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5574..6320)
DNA (747bp) protein (249aa)
ORC1-type DNA replication protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I6R5_NITGG rbh
cdc6; cell division control protein 6
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
13_1_40cm_3_scaffold_10190_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6947..7390
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IP51_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60514.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_10190_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7335..7919)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILM6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60513.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_10190_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(7973..8152)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMR5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60512.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_10190_13
unknown

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8303..8395
DNA (93bp) protein (31aa)

This feature has no annotations

13_1_40cm_3_scaffold_10190_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8386..9132
DNA (747bp) protein (249aa)
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:00
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IGJ8_NITGG rbh
13_1_40cm_3_scaffold_10190_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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9136..12045
DNA (2910bp) protein (970aa)
polC; DNA polymerase II large subunit (EC:2.7.7.7)
DNA polymerase II large subunit n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IK45_NITGG rbh
DNA polymerase D large subunit {ECO:0000313|EMBL:ADK25966.1}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
Displaying 15 items

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