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13_1_40cm_3_scaffold_16052

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_16052_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1..306)
DNA (306bp) protein (102aa)
Disulfide bond oxidoreductase D family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJC3_NITGG
ccdA; disulfide bond oxidoreductase D family protein
Disulfide bond oxidoreductase D family protein {ECO:0000313|EMBL:AFU60120.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
13_1_40cm_3_scaffold_16052_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(368..685)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFH9_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60121.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_16052_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(715..1035)
DNA (321bp) protein (107aa)
Putative transcriptional regulator, ArsR family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM95_NITGG
arsR family transcriptional regulator
Putative transcriptional regulator, ArsR family {ECO:0000313|EMBL:AFU60122.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
13_1_40cm_3_scaffold_16052_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1233..2627
DNA (1395bp) protein (465aa)
DEAD-box ATP-dependent RNA helicase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL30_NITGG rbh
DEAD/DEAH box helicase
DEAD-box ATP-dependent RNA helicase {ECO:0000313|EMBL:AFU60123.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nit
13_1_40cm_3_scaffold_16052_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2680..3174
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INX3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60124.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_16052_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

3205..3618
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJC8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60125.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_16052_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3787..4290
DNA (504bp) protein (168aa)
Putative adenylate kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFI4_NITGG
adenylate kinase
Putative adenylate kinase {ECO:0000313|EMBL:AFU60126.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaer
13_1_40cm_3_scaffold_16052_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4425..4892
DNA (468bp) protein (156aa)
Putative Sm-like ribonucleoprotein, core n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INX4_NITGG
Sm-like ribonucleoprotein, core
Putative Sm-like ribonucleoprotein, core {ECO:0000313|EMBL:AFU60129.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_3_scaffold_16052_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4895..6391
DNA (1497bp) protein (499aa)
tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase (EC:2.4.2.-)
tRNA-guanine(15) transglycosylase {ECO:0000256|HAMAP-Rule:MF_01634}; EC=2.4.2.48 {ECO:0000256|HAMAP-Rule:MF_01634};; 7-cyano-7-deazaguanine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01634}; A
tRNA-guanine(15) transglycosylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD1_NITGG rbh
13_1_40cm_3_scaffold_16052_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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6388..6984
DNA (597bp) protein (199aa)
nfi; endonuclease V (EC:3.1.21.7)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
Endonuclease V n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFJ0_NITGG rbh
13_1_40cm_3_scaffold_16052_11
unknown

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comp(6974..7090)
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_3_scaffold_16052_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7167..7700
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IM98_NITGG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60132.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_16052_13
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(7557..8009)
DNA (453bp) protein (151aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL37_NITGG
NADH:ubiquinone oxidoreductase chain I-like protein
NADH:ubiquinone oxidoreductase chain I-like protein {ECO:0000313|EMBL:AIF85339.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaer
13_1_40cm_3_scaffold_16052_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8141..8359)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILA5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60278.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
Displaying 14 items

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