ggKbase home page

13_1_40cm_3_scaffold_1905

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_1905_1
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1..1938)
DNA (1938bp) protein (646aa)
putative membrane associated signal transduction histidine kinase, with HAMP linker, ATP binding domain (EC:2.7.13.3)
Putative membrane associated signal transduction histidine kinase, with HAMP linker, ATP binding domain {ECO:0000313|EMBL:AIC16396.1}; EC=2.7.13.3 {ECO:0000313|EMBL:AIC16396.1};; TaxID=926571 species=
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALI2_METOI
13_1_40cm_3_scaffold_1905_2
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2012..2878)
DNA (867bp) protein (289aa)
exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:AIC16397.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_3_scaffold_1905_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2931..3344)
DNA (414bp) protein (138aa)
Response regulator n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9BW07_9CLOT
putative signal transduction response regulator, receiver domain
Putative signal transduction response regulator, receiver domain {ECO:0000313|EMBL:AIC16395.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; N
13_1_40cm_3_scaffold_1905_4
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(3341..5194)
DNA (1854bp) protein (618aa)
Sensor protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CW21_9ARCH
Sensor protein {ECO:0000313|EMBL:EGP93473.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum kore
integral membrane sensor signal transduction histidine kinase
13_1_40cm_3_scaffold_1905_5
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5343..5552
DNA (210bp) protein (70aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00070601}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00070601};; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseud
Two component, sigma54 specific, transcriptional regulator, Fis family id=4664618 bin=GWC2_Methylomirabilis_70_24 species=Actinomyces sp. oral taxon 181 genus=Actinomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_40cm_3_scaffold_1905_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5908..6723
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD5_NITGG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60135.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1905_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6724..7521
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFJ5_NITGG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU60136.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1905_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7535..8830
DNA (1296bp) protein (432aa)
Putative beta-lactamase domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA2_NITGG rbh
beta-lactamase domain-containing protein
Putative beta-lactamase domain protein {ECO:0000313|EMBL:AFU60137.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="
13_1_40cm_3_scaffold_1905_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(9021..9359)
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INX6_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60139.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1905_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(9437..9901)
DNA (465bp) protein (155aa)
cysS2; cysteine--tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1237085 species="Archaea; Th
Cysteine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD9_NITGG
13_1_40cm_3_scaffold_1905_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(9930..10757)
DNA (828bp) protein (276aa)
cysS2; cysteine--tRNA ligase (EC:6.1.1.16)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1237085 species="Archaea; Th
Cysteine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD9_NITGG
13_1_40cm_3_scaffold_1905_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10796..11092)
DNA (297bp) protein (99aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA5_NITGG
Rieske (2Fe-2S) domain-containing protein
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:AFU60142.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sourc
13_1_40cm_3_scaffold_1905_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

11220..11711
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL43_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU60143.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_1905_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

11743..11985
DNA (243bp) protein (81aa)
ahcY2; adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|RuleBase:RU000548};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaerac
Adenosylhomocysteinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INX7_NITGG
13_1_40cm_3_scaffold_1905_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


12017..13666
DNA (1650bp) protein (550aa)
metG; methionine--tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1237085 species="Archaea;
Methionine--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE3_NITGG rbh
13_1_40cm_3_scaffold_1905_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13681..14205
DNA (525bp) protein (175aa)
nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00243}; EC=2.7.7.1 {ECO:0000256|HAMAP-Rule:MF_00243};; NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00243}; NAD(+) pyrophosp
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFK6_NITGG rbh
13_1_40cm_3_scaffold_1905_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14467..15012
DNA (546bp) protein (182aa)
Putative mechanosensitive ion channel n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMA8_NITGG rbh
mechanosensitive ion channel
Putative mechanosensitive ion channel {ECO:0000313|EMBL:AFU60147.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
Displaying 17 items

View Taxonomy