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13_1_40cm_3_scaffold_4231

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_4231_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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1..159
DNA (159bp) protein (53aa)
Transcription initiation factor IIB n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHP6_NITGG
tfb6; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000313|EMBL:AFU58463.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nit
13_1_40cm_3_scaffold_4231_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(772..2040)
DNA (1269bp) protein (423aa)
apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000313|EMBL:AFU58466.1}; EC=5.4.2.- {ECO:0000313|EMBL:AFU58466.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; N
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAV7_NITGG rbh
13_1_40cm_3_scaffold_4231_3
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(2096..2455)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJL2_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIC14899.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera v
13_1_40cm_3_scaffold_4231_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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2782..3687
DNA (906bp) protein (302aa)
galT; UDP-glucose-hexose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Putative UDP-glucose-hexose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:AFU58468.1}; EC=2.7.7.12 {ECO:0000313|EMBL:AFU58468.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria;
Putative UDP-glucose-hexose-1-phosphate uridylyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHP8_NITGG rbh
13_1_40cm_3_scaffold_4231_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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3724..4155
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJL7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU58472.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_4231_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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4170..5585
DNA (1416bp) protein (472aa)
wecB; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
Putative UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:AFU58473.1}; EC=5.1.3.14 {ECO:0000313|EMBL:AFU58473.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaeral
Putative UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHQ2_NITGG rbh
13_1_40cm_3_scaffold_4231_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(5586..6845)
DNA (1260bp) protein (420aa)
glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157) rbh
Putative glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:AFU58474.1}; EC=2.3.1.157 {ECO:0000313|EMBL:AFU58474.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitros
Putative glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMZ3_NITGG rbh
13_1_40cm_3_scaffold_4231_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(6846..7550)
DNA (705bp) protein (235aa)
Nucleotidyl-transferasse n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IF97_NITGG rbh
nucleotidyl-transferasse
Nucleotidyl-transferasse {ECO:0000313|EMBL:AFU58475.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_4231_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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7907..8539
DNA (633bp) protein (211aa)
CBS and zinc finger C2H2 domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILZ6_NITGG
CBS and zinc finger C2H2 domain-containing protein
CBS and zinc finger C2H2 domain-containing protein {ECO:0000313|EMBL:AFU57464.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera
13_1_40cm_3_scaffold_4231_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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8641..9687
DNA (1047bp) protein (349aa)
Putative o-methyltransferase, family 2 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMV2_NITGG rbh
o-methyltransferase, family 2 rbh
Putative o-methyltransferase, family 2 {ECO:0000313|EMBL:AFU58269.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="
13_1_40cm_3_scaffold_4231_11

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comp(10278..10433)
DNA (156bp) protein (52aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8Q0E7_METMA
Uncharacterized protein {ECO:0000313|EMBL:KKL79657.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_40cm_3_scaffold_4231_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(10629..11963)
DNA (1335bp) protein (445aa)
thiD; phosphomethylpyrimidine kinase (EC:2.7.4.7 2.7.1.49) rbh
Putative phosphomethylpyrimidine kinase {ECO:0000313|EMBL:AFU58476.1}; EC=2.7.1.49 {ECO:0000313|EMBL:AFU58476.1};; EC=2.7.4.7 {ECO:0000313|EMBL:AFU58476.1};; TaxID=1237085 species="Archaea; Thaumarcha
Putative phosphomethylpyrimidine kinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAW6_NITGG rbh
13_1_40cm_3_scaffold_4231_13
unknown

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comp(13488..13619)
DNA (132bp) protein (44aa)

This feature has no annotations

13_1_40cm_3_scaffold_4231_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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13856..16978
DNA (3123bp) protein (1041aa)
Peptidoglycan-binding lysin domain-containing protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILL7_NITGG
peptidoglycan-binding lysin domain-containing protein
Peptidoglycan-binding lysin domain-containing protein {ECO:0000313|EMBL:AFU57159.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrosospha
13_1_40cm_3_scaffold_4231_15
RBG_13_Lokiarchaeota_45_8_curated, Lokiarchaeota, Archaea

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comp(17358..17819)
DNA (462bp) protein (154aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6Z2_DYAFD
bifunctional deaminase-reductase domain-containing protein Tax=RBG_13_Lokiarchaeota_45_8_curated
bifunctional deaminase-reductase domain-containing protein
13_1_40cm_3_scaffold_4231_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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18124..19428
DNA (1305bp) protein (435aa)
Putative hydroxymethylpyrimidine transporter CytX n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMZ4_NITGG rbh
cytX; hydroxymethylpyrimidine transporter CytX rbh
Putative hydroxymethylpyrimidine transporter CytX {ECO:0000313|EMBL:AFU58479.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.
13_1_40cm_3_scaffold_4231_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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19979..21085
DNA (1107bp) protein (369aa)
sucC; succinate--CoA ligase subunit beta (EC:6.2.1.5)
Succinate--CoA ligase (ADP-forming) beta subunit {ECO:0000313|EMBL:AFU58480.1}; EC=6.2.1.5 {ECO:0000313|EMBL:AFU58480.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphae
Succinate--CoA ligase (ADP-forming) beta subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA1_NITGG rbh
13_1_40cm_3_scaffold_4231_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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21090..22016
DNA (927bp) protein (309aa)
sucD; succinate--CoA ligase subunit alpha (EC:6.2.1.5) rbh
Succinate--CoA ligase (ADP-forming) alpha subunit {ECO:0000313|EMBL:AFU58481.1}; EC=6.2.1.5 {ECO:0000313|EMBL:AFU58481.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrosospha
Succinate--CoA ligase (ADP-forming) alpha subunit n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAX0_NITGG rbh
13_1_40cm_3_scaffold_4231_19
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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22356..22496
DNA (141bp) protein (47aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84079.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
13_1_40cm_3_scaffold_4231_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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22439..23332
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHR0_NITGG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU58483.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_4231_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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23425..24447
DNA (1023bp) protein (341aa)
Calcium/cation antiporter family protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IFA5_NITGG rbh
calcium/cation antiporter family protein
Calcium/cation antiporter family protein {ECO:0000313|EMBL:AFU58485.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_3_scaffold_4231_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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24476..24952
DNA (477bp) protein (159aa)
Putative UspA domain protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IAX5_NITGG
UspA domain-containing protein
Putative UspA domain protein {ECO:0000313|EMBL:AFU58486.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososph
13_1_40cm_3_scaffold_4231_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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25334..25627
DNA (294bp) protein (98aa)
UPF0147 protein Ngar_c15550 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IMZ6_NITGG
hypothetical protein
UPF0147 protein Ngar_c15550 {ECO:0000256|HAMAP-Rule:MF_00342}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitroso
13_1_40cm_3_scaffold_4231_24
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(25628..25765)
DNA (138bp) protein (46aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF84070.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
Displaying 24 items

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