ggKbase home page

13_1_40cm_3_scaffold_583

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_583_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2..1066
DNA (1065bp) protein (355aa)
truB; tRNA pseudouridine synthase B (EC:5.4.99.-)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IC89_NITGG rbh
13_1_40cm_3_scaffold_583_trna_1
unknown

Not on your lists

1319..1419
DNA (101bp)
transferRNA
13_1_40cm_3_scaffold_583_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(1401..2123)
DNA (723bp) protein (241aa)
Putative transmembrane protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEK0_NITGG rbh
transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:AFU57193.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrosos
13_1_40cm_3_scaffold_583_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2120..2362)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57194.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_583_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(2397..2753)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7I3_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57196.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_583_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2819..3181
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHE8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57197.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_583_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

3209..4528
DNA (1320bp) protein (440aa)
Putative UPF0142 protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEK3_NITGG rbh
hypothetical protein
Putative UPF0142 protein {ECO:0000313|EMBL:AFU57198.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_583_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4513..5187
DNA (675bp) protein (225aa)
Putative TfuA domain protein, core n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP5_NITGG rbh
TfuA domain-containing protein, core
Putative TfuA domain protein, core {ECO:0000313|EMBL:AFU57199.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitr
13_1_40cm_3_scaffold_583_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(5171..5539)
DNA (369bp) protein (123aa)
Putative signal transduction response regulator n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICC7_NITGG
signal transduction response regulator
Putative signal transduction response regulator {ECO:0000313|EMBL:AFU57200.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;"
13_1_40cm_3_scaffold_583_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5637..6191
DNA (555bp) protein (185aa)
Putative ATP--cobalamin adenosyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7I6_NITGG rbh
ATP--cobalamin adenosyltransferase
Putative ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:AFU57201.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sou
13_1_40cm_3_scaffold_583_10
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

6629..7150
DNA (522bp) protein (174aa)
Putative metal dependent phosphohydrolase with HD domain n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEK6_NITGG
metal dependent phosphohydrolase with HD domain
Putative metal dependent phosphohydrolase with HD domain {ECO:0000313|EMBL:AFU57203.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrosos
13_1_40cm_3_scaffold_583_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7165..7476
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILP7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57204.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_583_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

7510..8751
DNA (1242bp) protein (414aa)
LOR/SDH bifunctional protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7J4_NITGG rbh
LOR/SDH bifunctional protein
LOR/SDH bifunctional protein {ECO:0000313|EMBL:AFU57211.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososph
13_1_40cm_3_scaffold_583_13
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

8896..9801
DNA (906bp) protein (302aa)
Membrane protease subunit, stomatin/prohibitin n=1 Tax=Caulobacter sp. AP07 RepID=J2Q3G0_9CAUL
stomatin-like protein
Stomatin-like protein {ECO:0000313|EMBL:AIC15644.1}; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera vie
13_1_40cm_3_scaffold_583_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

9791..10093
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IHF5_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57217.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_583_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10167..11606)
DNA (1440bp) protein (480aa)
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEL7_NITGG rbh
13_1_40cm_3_scaffold_583_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11606..13042)
DNA (1437bp) protein (479aa)
gatA; glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=123708
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ILQ1_NITGG rbh
13_1_40cm_3_scaffold_583_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(13044..13313)
DNA (270bp) protein (90aa)
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA amidotransferase subunit C {ECO:0000313|EMBL:AFU57220.1}; EC=6.3.5.- {ECO:0000313|EMBL:AFU57220.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrosospha
Aspartyl/glutamyl-tRNA amidotransferase subunit C n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICD9_NITGG
13_1_40cm_3_scaffold_583_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


comp(13313..14653)
DNA (1341bp) protein (447aa)
aspS1; aspartate--tRNA ligase (EC:6.1.1.12)
Aspartate--tRNA ligase {ECO:0000313|EMBL:AFU57221.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AFU57221.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae
Aspartate--tRNA ligase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0I7K0_NITGG rbh
13_1_40cm_3_scaffold_583_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(14795..15430)
DNA (636bp) protein (212aa)
Putative threonyl/alanyl--tRNA ligase, SAD n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEM1_NITGG rbh
threonyl/alanyl--tRNA ligase, SAD
Putative threonyl/alanyl--tRNA ligase, SAD {ECO:0000313|EMBL:AFU57223.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" sour
Displaying 20 items

View Taxonomy