ggKbase home page

13_1_40cm_3_scaffold_645

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_645_1
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

77..625
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INF0_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59259.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_645_2
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(615..1886)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE5_NITGG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU59258.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_645_3
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

1988..2860
DNA (873bp) protein (291aa)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1) rbh
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:AFU59257.1}; EC=2.7.6.1 {ECO:0000313|EMBL:AFU59257.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitroso
Ribose-phosphate pyrophosphokinase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL15_NITGG rbh
13_1_40cm_3_scaffold_645_4
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

2892..3809
DNA (918bp) protein (306aa)
rnz; ribonuclease Z (EC:3.1.26.11)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
Ribonuclease Z n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID03_NITGG rbh
13_1_40cm_3_scaffold_645_5
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

4148..4330
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH83_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59255.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_645_6
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(4334..5071)
DNA (738bp) protein (246aa)
Putative glycosyl transferase, group 2 family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE9_NITGG
glycosyl transferase, group 2 family
Putative glycosyl transferase, group 2 family {ECO:0000313|EMBL:AFU59254.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" s
13_1_40cm_3_scaffold_645_7
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(5125..5688)
DNA (564bp) protein (188aa)
Putative glycosyl transferase, group 2 family n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE9_NITGG
glycosyl transferase, group 2 family
Putative glycosyl transferase, group 2 family {ECO:0000313|EMBL:AFU59254.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" s
13_1_40cm_3_scaffold_645_8
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

5979..6509
DNA (531bp) protein (177aa)
Transcription factor IIB, cyclin-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE2_NITGG
tfb8; transcription factor IIB, cyclin-like protein
Transcription factor IIB, cyclin-like protein {ECO:0000313|EMBL:AFU59253.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" s
13_1_40cm_3_scaffold_645_9
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(6787..7686)
DNA (900bp) protein (300aa)
Putative serine/threonine-protein phosphatase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL14_NITGG rbh
serine/threonine-protein phosphatase
Putative serine/threonine-protein phosphatase {ECO:0000313|EMBL:AFU59252.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" s
13_1_40cm_3_scaffold_645_10
unknown

Not on your lists

7884..8000
DNA (117bp) protein (39aa)

This feature has no annotations

13_1_40cm_3_scaffold_645_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(8397..10040)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH79_NITGG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59250.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_645_12
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10041..11015)
DNA (975bp) protein (325aa)
Putative UDP-glucose 4-epimerase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE8_NITGG rbh
UDP-glucose 4-epimerase
Putative UDP-glucose 4-epimerase {ECO:0000313|EMBL:AFU59249.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitros
13_1_40cm_3_scaffold_645_13
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(11012..12502)
DNA (1491bp) protein (497aa)
Putative glycosyl transferase group 1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJE0_NITGG rbh
glycosyl transferase group 1
Putative glycosyl transferase group 1 {ECO:0000313|EMBL:AFU59248.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="N
13_1_40cm_3_scaffold_645_14
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(12480..13118)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL11_NITGG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59247.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_645_15
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

13265..13966
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICZ8_NITGG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59246.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_645_16
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

14048..15610
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH76_NITGG rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AFU59245.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_645_17
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

15762..15998
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE7_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59244.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_645_18
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

16110..16451
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD8_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59243.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_645_19
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(16452..17864)
DNA (1413bp) protein (471aa)
Putative gas vesicle protein GvpD n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL09_NITGG rbh
gvpD; gas vesicle protein GvpD
Putative gas vesicle protein GvpD {ECO:0000313|EMBL:AFU59242.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitro
13_1_40cm_3_scaffold_645_20
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18013..18327
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ICZ4_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59241.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
13_1_40cm_3_scaffold_645_21
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18341..18784
DNA (444bp) protein (148aa)
50S ribosomal protein L32e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IH73_NITGG
rpl32e; 50S ribosomal protein L32e
R-protein L32e {ECO:0000313|EMBL:ADK26046.1}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candida
13_1_40cm_3_scaffold_645_22
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

18833..19159
DNA (327bp) protein (109aa)
50S ribosomal protein L19e n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0INE6_NITGG
rpl19e; 50S ribosomal protein L19e
R-protein L19e {ECO:0000313|EMBL:ADK26036.1}; Flags: Fragment;; TaxID=497727 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candida
13_1_40cm_3_scaffold_645_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19156..19482)
DNA (327bp) protein (109aa)
Putative methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD6_NITGG
methylated-DNA--protein-cysteine methyltransferase
Putative methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:AFU59238.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitro
13_1_40cm_3_scaffold_645_24
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(19513..20274)
DNA (762bp) protein (254aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-) rbh
Putative D-tyrosyl-tRNA(Tyr) deacylase {ECO:0000313|EMBL:AFU59237.1}; EC=3.1.-.- {ECO:0000313|EMBL:AFU59237.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nit
Putative D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IL02_NITGG rbh
13_1_40cm_3_scaffold_645_25
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists


20409..21065
DNA (657bp) protein (219aa)
Transcription elongation factor Spt5 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH71_NITGG rbh
nusG; transcription antitermination protein NusG rbh
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source
13_1_40cm_3_scaffold_645_26
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21140..21811
DNA (672bp) protein (224aa)
Putative siroheme synthase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0INE5_NITGG rbh
siroheme synthase
Putative siroheme synthase {ECO:0000313|EMBL:AFU59234.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphae
13_1_40cm_3_scaffold_645_27
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

21787..23100
DNA (1314bp) protein (438aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJD3_NITGG rbh
13_1_40cm_3_scaffold_645_28
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

23084..24082
DNA (999bp) protein (333aa)
hemB1; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales;
Delta-aminolevulinic acid dehydratase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IKZ6_NITGG rbh
13_1_40cm_3_scaffold_645_trna_1
unknown

Not on your lists

24726..24800
DNA (75bp)
transferRNA
13_1_40cm_3_scaffold_645_29
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(24782..25003)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH69_NITGG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU59230.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
Displaying items 1-30 of 37 in total

View Taxonomy