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13_1_40cm_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_15_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

1..513
DNA (513bp) protein (171aa)
Transposase, IS4 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PH01_9BACT
transposase, IS4 Tax=GWC2_Gemmatimonadetes_71_10_curated
transposase, IS4
13_1_40cm_scaffold_15_2
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(628..1602)
DNA (975bp) protein (325aa)
YVTN beta-propeller repeat-containing protein id=14429063 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
YVTN beta-propeller repeat-containing protein Tax=CSP1_5_NC10
40-residue YVTN family beta-propeller repeat protein
13_1_40cm_scaffold_15_3
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1616..2344)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SAB6_9RHIZ
hypothetical protein
Blr6202 protein {ECO:0000313|EMBL:BAC51467.1}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoeffici
13_1_40cm_scaffold_15_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2356..3579)
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI000367365C
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM31262.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinu
extracellular solute-binding protein family 3
13_1_40cm_scaffold_15_5
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3693..3884)
DNA (192bp) protein (64aa)
PQQ-dependent dehydrogenase, methanol/ethanol family n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ES75_METSB
PQQ-dependent dehydrogenase
PQQ-dependent dehydrogenase, methanol/ethanol family {ECO:0000313|EMBL:ACK52290.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiacea
13_1_40cm_scaffold_15_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3881..5407)
DNA (1527bp) protein (509aa)
Methanol dehydrogenase {ECO:0000313|EMBL:ETW97015.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
mxaF; methanol dehydrogenase large subunit id=14429049 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
putative methanol dehydrogenase MoxF
13_1_40cm_scaffold_15_7
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(5643..6620)
DNA (978bp) protein (326aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 77 RepID=UPI0003631991
beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4) Tax=CSP1_5_NC10
beta-ribofuranosylaminobenzene 5'-phosphate synthase. Involved in methanopterin biosynthesis (orf4)
13_1_40cm_scaffold_15_8
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(6617..7192)
DNA (576bp) protein (192aa)
hypothetical protein id=14429012 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein
13_1_40cm_scaffold_15_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7189..7851)
DNA (663bp) protein (221aa)
anthranilate synthase component II (EC:4.1.3.27); K01658 anthranilate synthase component II [EC:4.1.3.27] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
trpG; anthranilate synthase component II (EC:4.1.3.27)
TrpG panthranilate synthase component II (Glutamine amido-transferase) protein n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82Y73_NITEU
13_1_40cm_scaffold_15_10
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7848..9314)
DNA (1467bp) protein (489aa)
Anthranilate synthase component 1 {ECO:0000313|EMBL:EQB29047.1}; EC=4.1.3.27 {ECO:0000313|EMBL:EQB29047.1};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellacea
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002E6109E
para-aminobenzoate synthase subunit I
13_1_40cm_scaffold_15_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(9311..10750)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJW5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE67548.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_scaffold_15_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(10747..11106)
DNA (360bp) protein (120aa)
4a-hydroxytetrahydrobiopterin dehydratase {ECO:0000256|SAAS:SAAS00118034}; EC=4.2.1.96 {ECO:0000256|SAAS:SAAS00118034};; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetale
Pterin-4a-carbinolamine dehydratase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJV0_SINAD
pterin-4a-carbinolamine dehydratase
13_1_40cm_scaffold_15_13
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11128..11964)
DNA (837bp) protein (279aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0X2_NITHN
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADE14529.1}; TaxID=472759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitros
13_1_40cm_scaffold_15_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11979..13652)
DNA (1674bp) protein (558aa)
L-lactate transport n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HA99_ANADF
L-lactate transport
L-lactate transport {ECO:0000313|EMBL:ABS25645.1}; Flags: Precursor;; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
13_1_40cm_scaffold_15_15
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13770..14489
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKC5_9BACT
Contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIX12139.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source=
hypothetical protein
13_1_40cm_scaffold_15_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(14439..15056)
DNA (618bp) protein (206aa)
Delta 1-pyrroline-5-carboxylate synthetase id=14429018 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
Delta 1-pyrroline-5-carboxylate synthetase Tax=CSP1_5_NC10
putative kinase, aspartokinase/uridylate kinase
13_1_40cm_scaffold_15_17

Not on your lists

comp(15053..16084)
DNA (1032bp) protein (344aa)
Conserved protein Orf9 n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS5_9BACT
Conserved protein Orf9 {ECO:0000313|EMBL:AAY96686.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
tetrahydromethanopterin biosynthesis protein
13_1_40cm_scaffold_15_18

Not on your lists

16111..16893
DNA (783bp) protein (261aa)
Orf17 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN2_9BACT
Orf17 {ECO:0000313|EMBL:AAY89282.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
hisA/hisF family protein
13_1_40cm_scaffold_15_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(16872..17375)
DNA (504bp) protein (168aa)
hypothetical protein; K01737 6-pyruvoyl tetrahydrobiopterin synthase [EC:4.2.3.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Putative 6-pyruvoyl tetrahydropterin synthase n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIS7_9BACT
6-pyruvoyl-tetrahydropterin synthase
13_1_40cm_scaffold_15_20

Not on your lists

comp(17362..18171)
DNA (810bp) protein (270aa)
Triphosphoribosyl-dephospho-CoA synthase {ECO:0000256|SAAS:SAAS00100821}; EC=2.4.2.52 {ECO:0000256|SAAS:SAAS00100821};; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bact
Orf7 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN3_9BACT
Triphosphoribosyl-dephospho-CoA synthetase
13_1_40cm_scaffold_15_21

Not on your lists

comp(18273..19178)
DNA (906bp) protein (302aa)
Orf5 n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN4_9BACT
Orf5 {ECO:0000313|EMBL:AAY89280.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
hypothetical protein
13_1_40cm_scaffold_15_22
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19181..19582)
DNA (402bp) protein (134aa)
Ethyl tert-butyl ether degradation EthD n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0J3H5_CYCMS
ethyl tert-butyl ether degradation EthD Tax=RBG_16_Anaeromyxobacter_69_14_curated
ethyl tert-butyl ether degradation EthD
13_1_40cm_scaffold_15_23

Not on your lists

comp(19621..20586)
DNA (966bp) protein (322aa)
Methenyltetrahydromethanopterin cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; EC=3.5.4.27 {ECO:0000256|HAMAP-Rule:MF_00486};; Methenyl-H4MPT cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_00486}; TaxID
mch; methenyltetrahydromethanopterin cyclohydrolase (Methenyl-H4MPT cyclohydrolase) (mch) (EC:3.5.4.27)
Methylene tetrahydromethanopterin cyclohydrolase n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIN5_9BACT
13_1_40cm_scaffold_15_24
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20583..21347)
DNA (765bp) protein (255aa)
fhcC; formyltransferase/hydrolase complex subunit gamma (fhcC) (EC:1.2.99.5) Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
fhcC; formyltransferase/hydrolase complex subunit gamma (fhcC) (EC:1.2.99.5) id=14429007 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
fhcC; formyltransferase/hydrolase complex subunit gamma (fhcC) (EC:1.2.99.5)
13_1_40cm_scaffold_15_25

Not on your lists

comp(21344..22234)
DNA (891bp) protein (297aa)
formylmethanofuran--tetrahydromethanopterin formyltransferase (EC:2.3.1.101)
Formyltransferase/hydrolase complex subunit D (Fragment) n=1 Tax=uncultured bacterium RepID=Q52UU7_9BACT
Formyltransferase/hydrolase complex subunit D {ECO:0000313|EMBL:AAX93743.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
13_1_40cm_scaffold_15_26
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22231..23865)
DNA (1635bp) protein (545aa)
endonuclease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C45AF
fhcA; formyltransferase/hydrolase complex subunit alpha (fhcA) Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
formylmethanofuran dehydrogenase subunit A
13_1_40cm_scaffold_15_27

Not on your lists

comp(23862..25112)
DNA (1251bp) protein (417aa)
Formyltransferase/hydrolase complex subunit B n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIT2_9BACT
Formyltransferase/hydrolase complex subunit B {ECO:0000313|EMBL:AAY96679.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
formylmethanofuran dehydrogenase subunit B
13_1_40cm_scaffold_15_28

Not on your lists

comp(25109..26269)
DNA (1161bp) protein (387aa)
OrfY n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP8_9BACT
OrfY {ECO:0000313|EMBL:AAY89266.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
hypothetical protein
13_1_40cm_scaffold_15_29

Not on your lists

comp(26266..27351)
DNA (1086bp) protein (362aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIP9_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY89265.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
predicted butyrate kinase
13_1_40cm_scaffold_15_30

Not on your lists

comp(27356..28237)
DNA (882bp) protein (294aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
NADP-linked methylene tetrahydromethanopterin dehydrogenase n=1 Tax=uncultured bacterium BAC10-10 RepID=Q4JIQ0_9BACT
NADP-linked methylene tetrahydromethanopterin dehydrogenase {ECO:0000313|EMBL:AAY89264.1}; TaxID=333372 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-10.;"
Displaying items 1-30 of 83 in total

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