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13_1_40cm_scaffold_432

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_432_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(51..1019)
DNA (969bp) protein (323aa)
qor; quinone oxidoreductase (EC:1.6.5.5) Tax=GWA2_Rokubacteria_73_35_curated
Quinone oxidoreductase (NADPH:quinone reductase) id=4380010 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
alcohol dehydrogenase
13_1_40cm_scaffold_432_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1339..1590
DNA (252bp) protein (84aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
NAD-binding 6-phosphogluconate dehydrogenase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9LIQ2_9RHIZ
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:CDM65852.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyr
13_1_40cm_scaffold_432_3
unknown

Not on your lists

1851..2297
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_scaffold_432_4
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2332..2607)
DNA (276bp) protein (92aa)
ThiamineS protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UCF5_ANASK
sulfur transfer protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ACG74791.1}; Flags: Precursor;; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromy
13_1_40cm_scaffold_432_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2592..3551)
DNA (960bp) protein (320aa)
Homoserine kinase {ECO:0000256|HAMAP-Rule:MF_00384, ECO:0000256|SAAS:SAAS00080104}; Short=HK {ECO:0000256|HAMAP-Rule:MF_00384};; Short=HSK {ECO:0000256|HAMAP-Rule:MF_00384};; EC=2.7.1.39 {ECO:0000256|
hypothetical protein n=1 Tax=Nodosilinea nodulosa RepID=UPI00036FBF43
Homoserine kinase
13_1_40cm_scaffold_432_6
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3548..4813)
DNA (1266bp) protein (422aa)
Threonine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGE0_ANADF
threonine synthase
Threonine synthase {ECO:0000313|EMBL:ABS27786.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source
13_1_40cm_scaffold_432_7
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(5000..6190)
DNA (1191bp) protein (397aa)
aspartate aminotransferase (transaminase a) (aspat) (EC:2.6.1.1)
Aspartate aminotransferase (Transaminase a) (Aspat) {ECO:0000313|EMBL:ACM06574.1}; EC=2.6.1.1 {ECO:0000313|EMBL:ACM06574.1};; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicr
Aspartate aminotransferase (Transaminase a) (Aspat) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3T8_THERP
13_1_40cm_scaffold_432_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6248..6805)
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=EFP_GEMAT
efp; elongation factor P; K02356 elongation factor P Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Elongation factor P
13_1_40cm_scaffold_432_9
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(7060..8637)
DNA (1578bp) protein (526aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
hypothetical protein id=14425464 bin=bin1_lowGC species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
13_1_40cm_scaffold_432_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8805..9683
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA91_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_432_11
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9919..10401
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82PQ5_STRAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC68527.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATC
13_1_40cm_scaffold_432_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

10593..11516
DNA (924bp) protein (308aa)
L-proline dehydrogenase (EC:1.5.99.8); K00318 proline dehydrogenase [EC:1.5.99.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Proline dehydrogenase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SV36_9BACT id=5223515 bin=16ft_combo_ws3_JS1 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
proline dehydrogenase
13_1_40cm_scaffold_432_13
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11540..12742
DNA (1203bp) protein (401aa)
Class-V aminotransferase n=1 Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BTY4_STRBB
class V aminotransferase
Class V aminotransferase {ECO:0000313|EMBL:AJT63872.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
13_1_40cm_scaffold_432_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12856..14070
DNA (1215bp) protein (405aa)
56kDa selenium binding protein (SBP56) n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8N0_SINAD
56kDa selenium binding protein (SBP56)
56kDa selenium binding protein (SBP56) {ECO:0000313|EMBL:AGA24986.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sin
13_1_40cm_scaffold_432_15
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(14117..15019)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN20_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE68120.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
13_1_40cm_scaffold_432_16
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

15089..16585
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JFQ7_ANAD2 id=5223517 bin=16ft_combo_ws3_JS1 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
hypothetical protein
13_1_40cm_scaffold_432_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17002..18177)
DNA (1176bp) protein (392aa)
Alkaline phosphatase (EC:3.1.3.1) Tax=RBG_16_Gemmatimonadetes_66_8_curated
Alkaline phosphatase (EC:3.1.3.1)
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000379C8D3
13_1_40cm_scaffold_432_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

18344..18562
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q0_GEMAT
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Translation initiation factor IF-1
13_1_40cm_scaffold_432_19
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18559..19569
DNA (1011bp) protein (337aa)
Fatty acid desaturase n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YCN0_9BRAD
Fatty acid desaturase {ECO:0000313|EMBL:EHR01210.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. W
fatty acid desaturase
13_1_40cm_scaffold_432_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19583..20935)
DNA (1353bp) protein (451aa)
Putative sensory box histidine kinase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MWQ2_CORCM
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ntrY; putative sensory box histidine kinase
13_1_40cm_scaffold_432_21
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20925..22286)
DNA (1362bp) protein (454aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V0A2_TERSS
zraR; sigma-54 dependent DNA-binding response regulator Tax=GWC2_Gemmatimonadetes_71_10_curated
sigma-54 factor interaction domain-containing protein
Displaying 21 items

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