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13_1_40cm_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_67_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1..561
DNA (561bp) protein (187aa)
4-alpha-glucanotransferase (Amylomaltase) (Disproportionating enzyme) (D-enzyme) (EC:2.4.1.25) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_67_2
RBG_16_Elusimicrobia_66_12_curated, Elusimicrobia, Bacteria

Not on your lists

549..1652
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ54_9BACT
hypothetical protein Tax=RBG_16_Elusimicrobia_66_12_curated
hypothetical protein
13_1_40cm_scaffold_67_3
unknown

Not on your lists

comp(1683..2198)
DNA (516bp) protein (172aa)

This feature has no annotations

13_1_40cm_scaffold_67_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(2485..3009)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFX4_SINAD
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative restriction endonuclease
13_1_40cm_scaffold_67_5
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3299..3721)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Z9_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38009.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
13_1_40cm_scaffold_67_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3972..4514
DNA (543bp) protein (181aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_67_7
Mariprofundus ferrooxydans, Mariprofundus, Mariprofundales, Zetaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4653..5642
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Mariprofundus ferrooxydans PV-1 RepID=Q0F1L4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EAU55177.1}; TaxID=314345 species="Bacteria; Proteobacteria; Zetaproteobacteria; Mariprofundales; Mariprofundaceae; Mariprofundus.;" source="Mariprofundus fer
HI0933 family protein
13_1_40cm_scaffold_67_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5651..6322)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D834_9BURK
transposase for insertion sequence Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_67_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

6390..6971
DNA (582bp) protein (194aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Q9_GEMAT
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
RNA polymerase sigma factor, sigma-70 family
13_1_40cm_scaffold_67_10
unknown

Not on your lists

6968..7333
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_scaffold_67_11
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

7344..7769
DNA (426bp) protein (142aa)
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
13_1_40cm_scaffold_67_12
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7886..8953)
DNA (1068bp) protein (356aa)
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=GWA2_Rokubacteria_73_35_curated
murB; UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase id=4793438 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_67_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(9043..9837)
DNA (795bp) protein (265aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
alias=16ft_combo_ws3_scaffold_3415_20 id=24596998 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
13_1_40cm_scaffold_67_14
unknown

Not on your lists

10182..10778
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_40cm_scaffold_67_15
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(10826..11950)
DNA (1125bp) protein (375aa)
gtuS2-23; Glycosyltransferase, family 2 (EC:2.4.1.-) Tax=RBG_16_RIF_WS3X_71_46_curated
Family 2 glycosyl transferase n=1 Tax=Streptomyces auratus AGR0001 RepID=J2K796_9ACTO id=5224820 bin=16ft_combo_ws3_JS1 species=Streptomyces auratus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Glycosyltransferase like family 2
13_1_40cm_scaffold_67_16
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12129..13268)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGR4_ANADF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS27910.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
13_1_40cm_scaffold_67_17
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13296..13697
DNA (402bp) protein (134aa)
Response regulator receiver protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIN4_9BACT id=5223118 bin=16ft_combo_ws3_JS1 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Uncharacterized protein {ECO:0000313|EMBL:ETX04562.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
pleD; response regulator PleD
13_1_40cm_scaffold_67_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13694..16480)
DNA (2787bp) protein (929aa)
aconitate hydratase 1; K01681 aconitate hydratase 1 [EC:4.2.1.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
Aconitate hydratase 1 n=1 Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GAI2_CHLAD
aconitate hydratase 1
13_1_40cm_scaffold_67_19
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16477..16854)
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GEF5_GEOUR
hypothetical protein Tax=RBG_16_Betaproteobacteria_58_11_curated
hypothetical protein
13_1_40cm_scaffold_67_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(16851..17360)
DNA (510bp) protein (170aa)
GCN5-related N-acetyltransferase n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NQ83_ROSCS
N-acetyltransferase GCN5 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
N-acetyltransferase GCN5
13_1_40cm_scaffold_67_21
unknown

Not on your lists

17399..17764
DNA (366bp) protein (122aa)

This feature has no annotations

13_1_40cm_scaffold_67_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17774..19705)
DNA (1932bp) protein (644aa)
PAS sensor protein n=1 Tax=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) RepID=A9W9X5_CHLAA
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PAS sensor protein
13_1_40cm_scaffold_67_23
RLO_PLX_64_10, Bacteria

Not on your lists

19787..20818
DNA (1032bp) protein (344aa)
serine protease; K01362 [EC:3.4.21.-] Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
HtrA2 peptidase (EC:3.4.21.108)
HtrA2 peptidase n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9X9C0_9CHRO
13_1_40cm_scaffold_67_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(20846..22075)
DNA (1230bp) protein (410aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14627544 bin=bin7_NC10_sister species=unknown genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
13_1_40cm_scaffold_67_25
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(22168..23871)
DNA (1704bp) protein (568aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5I6_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_67_26
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23913..25805
DNA (1893bp) protein (631aa)
ABC transporter ATP-binding protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002F2155D
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ABC transporter
13_1_40cm_scaffold_67_27
unknown

Not on your lists

25862..26263
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_40cm_scaffold_67_28
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(26253..26654)
DNA (402bp) protein (134aa)
Acyl dehydratase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HS93_9EURY
MaoC domain protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:AHG88199.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_67_29
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(26651..27706)
DNA (1056bp) protein (352aa)
hypothetical protein; K00641 homoserine O-acetyltransferase [EC:2.3.1.31] Tax=GWC2_Gemmatimonadetes_71_10_curated
PREDICTED: acetyl-CoA--deacetylcephalosporin C acetyltransferase-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C18AEF
hypothetical protein
13_1_40cm_scaffold_67_30
unknown

Not on your lists

comp(27703..28110)
DNA (408bp) protein (136aa)

This feature has no annotations

Displaying items 1-30 of 95 in total

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