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13_1_40cm_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 160 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_0_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

72..1697
DNA (1626bp) protein (542aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG89857.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_0_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1787..3175
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_0_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3172..4542
DNA (1371bp) protein (457aa)
GTPase Der n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DER_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
GTP-binding protein engA
13_1_40cm_scaffold_0_4
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

4539..5156
DNA (618bp) protein (206aa)
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] id=7200806 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
membrane protein
13_1_40cm_scaffold_0_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5173..6213
DNA (1041bp) protein (347aa)
gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Geobacter sp. (strain M18) RepID=E8WJD9_GEOS8
Glycerol-3-phosphate dehydrogenase [NAD(P)+]
13_1_40cm_scaffold_0_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

6210..6587
DNA (378bp) protein (126aa)
MerR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T6_GEMAT
MerR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
regulatory protein MerR
13_1_40cm_scaffold_0_7
RBG_16_Planctomycetes_59_8_curated, Planctomycetes, Bacteria

Not on your lists

6571..7272
DNA (702bp) protein (234aa)
glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GXY1_SORC5
Glycosyltransferase Tax=RBG_16_Planctomycetes_59_8_curated
13_1_40cm_scaffold_0_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7269..8018
DNA (750bp) protein (250aa)
surE; 5'-nucleotidase SurE (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
surE; 5'-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SURE_GEMAT
13_1_40cm_scaffold_0_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8000..8686
DNA (687bp) protein (229aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T8_GEMAT
Protein-L-isoaspartate O-methyltransferase
13_1_40cm_scaffold_0_10
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8679..9320
DNA (642bp) protein (214aa)
Membrane protein DedA n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5ED53_GEOBB
membrane protein DedA
Membrane protein DedA {ECO:0000313|EMBL:ACH37639.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjiensi
13_1_40cm_scaffold_0_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

9326..9598
DNA (273bp) protein (91aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
Acylphosphatase n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8JZF6_DEHLB
acylphosphatase
13_1_40cm_scaffold_0_12
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9626..10150
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN48_9DELT
adenine phosphoribosyltransferase
13_1_40cm_scaffold_0_trna_1
unknown

Not on your lists

10173..10246
DNA (74bp)
transferRNA
13_1_40cm_scaffold_0_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10340..11017
DNA (678bp) protein (226aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_40cm_scaffold_0_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11091..11930)
DNA (840bp) protein (280aa)
dapE; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DAPF_GEMAT
Diaminopimelate epimerase
13_1_40cm_scaffold_0_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11912..12634)
DNA (723bp) protein (241aa)
putative polyprenol-phosphate mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative polyprenol-phosphate mannosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U4_GEMAT
putative polyprenol-phosphate mannosyltransferase
13_1_40cm_scaffold_0_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12627..14969)
DNA (2343bp) protein (781aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A770_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_1_40cm_scaffold_0_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14956..15927)
DNA (972bp) protein (324aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U6_GEMAT
hypothetical membrane protein; K07027 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical membrane protein
13_1_40cm_scaffold_0_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15924..16451)
DNA (528bp) protein (176aa)
Methyltransferase type 11 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C228_SPHTD
hypothetical protein; K07027 Tax=RBG_16_Gemmatimonadetes_66_8_curated
methyltransferase type 11
13_1_40cm_scaffold_0_19
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

16590..17369
DNA (780bp) protein (260aa)
hypothetical protein id=24441462 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Schlesneria paludicola genus=Schlesneria taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
13_1_40cm_scaffold_0_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(17344..18510)
DNA (1167bp) protein (389aa)
glycosyltransferase (EC:2.4.-.-) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U7_GEMAT
glycosyl transferase group 1
13_1_40cm_scaffold_0_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18492..19553)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Woodsholea maritima RepID=UPI00037BEB93
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_0_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19547..20551)
DNA (1005bp) protein (335aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_0_23
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(20573..21775)
DNA (1203bp) protein (401aa)
YVTN family beta-propeller repeat protein n=1 Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RV33_MYCRN
surface antigen gene Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_40cm_scaffold_0_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21772..22731)
DNA (960bp) protein (320aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U8_GEMAT
glycosyl transferase family 2
13_1_40cm_scaffold_0_25
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(22728..23174)
DNA (447bp) protein (149aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated
RNA polymerase sigma-54 factor, RpoN
13_1_40cm_scaffold_0_26
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(23171..24145)
DNA (975bp) protein (325aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated
RNA polymerase sigma-54 factor, RpoN
13_1_40cm_scaffold_0_27
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(24142..25398)
DNA (1257bp) protein (419aa)
putative ABC transporter ATP-binding protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V0_GEMAT
ABC transporter related protein
13_1_40cm_scaffold_0_28
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(25395..26810)
DNA (1416bp) protein (472aa)
Marine sediment metagenome DNA, contig: S01H1_S04962 Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_0_29
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(26807..27460)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8V2_GEMAT
hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
protein of unknown function DUF1239
Displaying items 1-30 of 160 in total

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