ggKbase home page

13_1_40cm_scaffold_1033

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_1033_1
unknown

Not on your lists

1..126
DNA (126bp) protein (42aa)

This feature has no annotations

13_1_40cm_scaffold_1033_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

123..809
DNA (687bp) protein (229aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4B0_THERP
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:CDM64161.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas met
HAD-superfamily hydrolase
13_1_40cm_scaffold_1033_3
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(838..2133)
DNA (1296bp) protein (432aa)
Putative uncharacterized protein n=1 Tax=uncultured nuHF2 cluster bacterium HF0500_31B05 RepID=E7C5Y0_9BACT
hypothetical protein Tax=RBG_13_Deltaproteobacteria_52_11_curated
hypothetical protein
13_1_40cm_scaffold_1033_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2094..2555)
DNA (462bp) protein (154aa)
transporter n=1 Tax=Salisaeta longa RepID=UPI0003B33004
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72199.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_1_40cm_scaffold_1033_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2560..3126)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MDI2_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47175.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_1_40cm_scaffold_1033_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(3141..4682)
DNA (1542bp) protein (514aa)
Beta-lactamase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CY5_SOLUE
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ABJ81081.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibact
13_1_40cm_scaffold_1033_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4781..7042)
DNA (2262bp) protein (754aa)
TonB-dependent receptor n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGY8_RHOM4
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACY47773.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
13_1_40cm_scaffold_1033_8
unknown

Not on your lists

comp(7052..7273)
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_40cm_scaffold_1033_9
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7518..8885
DNA (1368bp) protein (456aa)
succinate-semialdehyde dehydrogenase (NAD(P)(+)) (EC:1.2.1.16)
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) {ECO:0000313|EMBL:AEN72789.1}; EC=1.2.1.16 {ECO:0000313|EMBL:AEN72789.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incer
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK33_RHOMR
13_1_40cm_scaffold_1033_trna_1
unknown

Not on your lists

comp(9023..9107)
DNA (85bp)
transferRNA
13_1_40cm_scaffold_1033_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9231..9980
DNA (750bp) protein (250aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=4930082 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_40cm_scaffold_1033_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9977..10525
DNA (549bp) protein (183aa)
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC16_GEMAT
serine/threonine protein kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein kinase
13_1_40cm_scaffold_1033_12
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10504..11421
DNA (918bp) protein (306aa)
hypothetical protein id=3416154 bin=GWA2_Bacteroidetes_A19_40_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
id=4778733 Tax=GWA2_Bacteroidetes_40_15_curated
protein kinase
13_1_40cm_scaffold_1033_13
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11443..12276)
DNA (834bp) protein (278aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V0_ANADF
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ABS25146.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaero
13_1_40cm_scaffold_1033_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12286..13155)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003619ACB
Ku family containing protein; K10979 DNA end-binding protein Ku Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA repair protein
13_1_40cm_scaffold_1033_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13204..13671
DNA (468bp) protein (156aa)
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA ligase D n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8V2_ANADF
DNA ligase D
Displaying 16 items

View Taxonomy