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13_1_40cm_scaffold_241_16

Organism: 13_1_40CM_Gemmatimonadetes_69_22_partial

partial RP 16 / 55 BSCG 13 / 51 ASCG 7 / 38
Location: comp(17237..17524)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily id=2908079 bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 46.1
  • Coverage: 76.0
  • Bit_score: 64
  • Evalue 9.00e-08
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_RIF_CHLX_73_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 46.1
  • Coverage: 76.0
  • Bit_score: 64
  • Evalue 1.20e-07
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 91.0
  • Bit_score: 63
  • Evalue 4.30e-08

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Taxonomy

GWC2_RIF_CHLX_73_18_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 288
ATGACCCACCGCCTCATGCCGGATAGCCAACTGGTGCAGCTGATGGCCGCAGGCGACCGAGCGGCGCGCGCCGAGTTGTGCGATCGGCACCGCCTTTCCGTGTACGCGCAGGTGTACGTGGCGCTGGTCGATTCGGACGCGGCCGAGCAGGTCGTGGCCGAGACGTTCGATCGGGCTTGGCACACCGCCAGCGAGTTCACTCCCCGCGCCGGCAGTCCGCTCGCCTGGTTATCGGGGATCGCGCGGGCGCTGGCAGAGCGCCGGCGCACCGCGACGCCCTCACGGTGA
PROTEIN sequence
Length: 96
MTHRLMPDSQLVQLMAAGDRAARAELCDRHRLSVYAQVYVALVDSDAAEQVVAETFDRAWHTASEFTPRAGSPLAWLSGIARALAERRRTATPSR*