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13_1_40cm_scaffold_241

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_241_1
RBG_13_Deltaproteobacteria_58_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..540
DNA (540bp) protein (180aa)
multi-sensor hybrid histidine kinase Tax=RBG_13_Deltaproteobacteria_58_19_curated
Multi-sensor hybrid histidine kinase id=4788462 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative PAS/PAC sensor protein
13_1_40cm_scaffold_241_2
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

Not on your lists

537..3545
DNA (3009bp) protein (1003aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D44A0D
PAS domain S-box Tax=RBG_13_Chloroflexi_66_10_curated
multi-sensor hybrid histidine kinase
13_1_40cm_scaffold_241_3
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

3538..4134
DNA (597bp) protein (199aa)
Response regulator receiver protein n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EKM4_CORAD
response regulator receiver protein Tax=CG_Arma_02
response regulator receiver protein
13_1_40cm_scaffold_241_4
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

4203..4649
DNA (447bp) protein (149aa)
Response regulator receiver protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U0E8_9CYAN
Chemotaxis protein CheY {ECO:0000313|EMBL:KIF19105.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
response regulator receiver protein
13_1_40cm_scaffold_241_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

4736..7525
DNA (2790bp) protein (930aa)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABF42015.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABF42015.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
Multi-sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM85_KORVE
13_1_40cm_scaffold_241_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(7535..10408)
DNA (2874bp) protein (958aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM85_KORVE
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
multi-sensor hybrid histidine kinase
13_1_40cm_scaffold_241_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11036..12085
DNA (1050bp) protein (350aa)
holB; DNA polymerase III delta' subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III delta' subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U0_GEMAT
DNA polymerase III delta' subunit
13_1_40cm_scaffold_241_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12082..12564
DNA (483bp) protein (161aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=MOAC_AZOC5
molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Molybdenum cofactor biosynthesis C, bacterial-type
13_1_40cm_scaffold_241_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12621..13283
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
Lytic transglycosylase catalytic
13_1_40cm_scaffold_241_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13413..15071)
DNA (1659bp) protein (553aa)
transglycosylase, slt family; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative transglycosylase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U3_GEMAT
putative transglycosylase
13_1_40cm_scaffold_241_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15083..15511)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_241_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15521..15769)
DNA (249bp) protein (83aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_241_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(15766..16008)
DNA (243bp) protein (81aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_241_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16106..16969)
DNA (864bp) protein (288aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWC2_Gemmatimonadetes_71_10_curated
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Thermincola potens (strain JR) RepID=D5XAE5_THEPJ
13_1_40cm_scaffold_241_15
unknown

Not on your lists

17015..17209
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_40cm_scaffold_241_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(17237..17524)
DNA (288bp) protein (96aa)
RNA polymerase, sigma-24 subunit, ECF subfamily id=2908079 bin=GWC2_Chloroflexi_73_18 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_RIF_CHLX_73_18_curated
ECF subfamily RNA polymerase sigma-24 subunit
13_1_40cm_scaffold_241_17
RBG_13_Caldithrix_44_9_curated, Caldithrix, Bacteria

Not on your lists

17628..19478
DNA (1851bp) protein (617aa)
Uncharacterized protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF34_THET1
hypothetical protein Tax=RBG_13_Caldithrix_44_9_curated
Protein of unknown function DUF2961
13_1_40cm_scaffold_241_18
unknown

Not on your lists

19475..19732
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_40cm_scaffold_241_trna_1
unknown

Not on your lists

comp(19949..20021)
DNA (73bp)
transferRNA
13_1_40cm_scaffold_241_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20037..21461)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Chitiniphilus shinanonensis RepID=UPI0003748AAD
uroporphyrin-III C-methyltransferase
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:AHG88640.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_241_20
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(21458..23161)
DNA (1704bp) protein (568aa)
Sulfite reductase (NADPH) hemoprotein beta-component n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3T2_CALAS
cysI; sulfite reductase (NADPH) hemoprotein beta-component
Sulfite reductase (NADPH) hemoprotein beta-component {ECO:0000313|EMBL:BAL99919.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldi
13_1_40cm_scaffold_241_21
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23617..23862
DNA (246bp) protein (82aa)
ECF subfamily RNA polymerase sigma-24 subunit {ECO:0000313|EMBL:AJT63581.1}; TaxID=1403539 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
13_1_40cm_scaffold_241_22
RBG_16_Ignavibacteria_34_14_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23996..25537
DNA (1542bp) protein (514aa)
Peptidase S9 prolyl oligopeptidase active site domain protein n=1 Tax=mine drainage metagenome RepID=T1CBY4_9ZZZZ
peptidase S9 prolyl oligopeptidase Tax=RBG_16_Ignavibacteria_34_14_curated
WD40-like beta Propeller containing protein
13_1_40cm_scaffold_241_23

Not on your lists

25534..25962
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Eudoraea adriatica RepID=UPI000373635C
Peptidase S9 prolyl oligopeptidase active site domain protein {ECO:0000313|EMBL:EQD70572.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage
WD40-like beta Propeller containing protein
13_1_40cm_scaffold_241_24
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

25971..27149
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L6K8_HALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE49851.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
13_1_40cm_scaffold_241_25
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(27079..27891)
DNA (813bp) protein (271aa)
YdjC family protein n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8WWD7_ACISM
hypothetical protein
YdjC family protein {ECO:0000313|EMBL:ADW68520.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA
13_1_40cm_scaffold_241_26
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27908..28627)
DNA (720bp) protein (240aa)
Glycosyl transferase family 2 n=1 Tax=Geobacter metallireducens RCH3 RepID=H1L831_GEOME
glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
UDP-glucose--undecaprenyl-phosphate glucosyltransferase
13_1_40cm_scaffold_241_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

28736..29599
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035D2514
methyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
methyltransferase
13_1_40cm_scaffold_241_28
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

29640..30089
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJW3_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84975.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
Displaying 29 items

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