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13_1_40cm_scaffold_7280

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_7280_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

1..552
DNA (552bp) protein (184aa)
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U9_GEMAT
rpoN; RNA polymerase sigma factor; K03092 RNA polymerase sigma-54 factor Tax=RBG_16_Acidobacteria_68_9_curated
RNA polymerase sigma-54 factor, RpoN
13_1_40cm_scaffold_7280_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

549..1511
DNA (963bp) protein (321aa)
putative glycosyltransferase (EC:2.4.-.-) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U8_GEMAT
glycosyl transferase family 2
13_1_40cm_scaffold_7280_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

1524..2729
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Leifsonia sp. 109 RepID=UPI000362410A
surface antigen gene Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
putative cell surface protein
13_1_40cm_scaffold_7280_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2778..3869
DNA (1092bp) protein (364aa)
Glycosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U7_GEMAT
glycosyl transferase group 1
Glycosyl transferase group 1 {ECO:0000313|EMBL:AHG90785.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_7280_5

Not on your lists

3869..4942
DNA (1074bp) protein (358aa)
Methicillin resistance protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLV7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CEG11092.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
hypothetical protein
13_1_40cm_scaffold_7280_6
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4947..5411
DNA (465bp) protein (155aa)
UPI0003D1A06F related cluster n=1 Tax=unknown RepID=UPI0003D1A06F
Galactoside O-acetyltransferase {ECO:0000313|EMBL:KKH45520.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarc
galactoside-O-acetyltransferase
13_1_40cm_scaffold_7280_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5975..6829
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MIY8_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY48446.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
13_1_40cm_scaffold_7280_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6822..7745
DNA (924bp) protein (308aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U6_GEMAT
hypothetical membrane protein; K07027 Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_1_40cm_scaffold_7280_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7742..10162
DNA (2421bp) protein (807aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A770_GEMAT
hypothetical membrane protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical membrane protein
13_1_40cm_scaffold_7280_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10155..10877
DNA (723bp) protein (241aa)
putative polyprenol-phosphate mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative polyprenol-phosphate mannosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8U4_GEMAT
putative polyprenol-phosphate mannosyltransferase
13_1_40cm_scaffold_7280_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10898..11437
DNA (540bp) protein (180aa)
dapE; diaminopimelate epimerase (EC:5.1.1.7); K01778 diaminopimelate epimerase [EC:5.1.1.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Diaminopimelate epimerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DAPF_GEMAT
Diaminopimelate epimerase
13_1_40cm_scaffold_7280_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11701..12372)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Pontibacter roseus RepID=UPI00037C084F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_40cm_scaffold_7280_trna_1
unknown

Not on your lists

comp(12426..12499)
DNA (74bp)
transferRNA
13_1_40cm_scaffold_7280_13
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12523..12903)
DNA (381bp) protein (127aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000
Adenine phosphoribosyltransferase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CHW6_MYXFH
adenine phosphoribosyltransferase
13_1_40cm_scaffold_7280_14
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

comp(13017..13289)
DNA (273bp) protein (91aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
Acylphosphatase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=ACYP_KORVE
acylphosphatase
13_1_40cm_scaffold_7280_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13293..13940)
DNA (648bp) protein (216aa)
SNARE associated Golgi protein-related protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E083_GEOSM
membrane-associated protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_7280_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(13933..14601)
DNA (669bp) protein (223aa)
pcm; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T8_GEMAT
Protein-L-isoaspartate O-methyltransferase
13_1_40cm_scaffold_7280_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14583..15332)
DNA (750bp) protein (250aa)
surE; 5'-nucleotidase SurE (EC:3.1.3.5); K03787 5'-nucleotidase [EC:3.1.3.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
surE; 5'-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase SurE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=SURE_GEMAT
13_1_40cm_scaffold_7280_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15329..16060)
DNA (732bp) protein (244aa)
Glycosyl transferase family 2 n=1 Tax=uncultured Verrucomicrobia bacterium RepID=D2DXQ2_9BACT
glycosyltransferase, group 2 family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
family 2 glycosyl transferase
13_1_40cm_scaffold_7280_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16044..16421)
DNA (378bp) protein (126aa)
MerR family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T6_GEMAT
MerR family transcriptional regulator Tax=RBG_16_Gemmatimonadetes_66_8_curated
regulatory protein MerR
13_1_40cm_scaffold_7280_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(16418..17401)
DNA (984bp) protein (328aa)
gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T5_GEMAT
Glycerol-3-phosphate dehydrogenase [NAD(P)+]
13_1_40cm_scaffold_7280_21
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(17359..17811)
DNA (453bp) protein (151aa)
membrane protein; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
Glycerol-3-phosphate acyltransferase n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RT14_LEAB4
hypothetical protein
13_1_40cm_scaffold_7280_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(17946..19274)
DNA (1329bp) protein (443aa)
GTPase Der n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DER_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
GTP-binding protein engA
13_1_40cm_scaffold_7280_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(19271..19858)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8T2_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_40cm_scaffold_7280_24
unknown

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20059..20229
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_40cm_scaffold_7280_25
unknown

Not on your lists

comp(20644..21807)
DNA (1164bp) protein (388aa)

This feature has no annotations

Displaying 26 items

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