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13_1_40cm_scaffold_2728_2

Organism: 13_1_40CM_Gemmatimonadetes_70_15_partial

partial RP 24 / 55 BSCG 25 / 51 ASCG 9 / 38
Location: comp(1000..2238)

Top 3 Functional Annotations

Value Algorithm Source
leuA3; 2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 405.0
  • Bit_score: 428
  • Evalue 1.70e-117
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 408.0
  • Bit_score: 462
  • Evalue 6.40e-127
2-isopropylmalate synthase Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 414.0
  • Bit_score: 610
  • Evalue 2.00e-171

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1239
ATGGACGAGCGCGAGCTGATCTACGACTGGAACAAGGCGCCCGGAGGGGGGAGGTTCGACTGGGCGCGCGCCCGCGTGGACTTGAATGACGAGACGTTGCGCGACGGGCTGCAGTCGCCCTCCGTGCGCGATCCCTCGCTCGAGGTCAAGAGGAGGCTCCTCCACCTCATGGCCGACCTCGGCATCGTGGCGGCGGACATCGGGCTGCCGGGCGCTGGGCCGCGGGTGGTGGAGCAGGTGCGGGTACTCGCCCGAGAGATCCGCGACCACAACCTGCCGATCTTCCCGAACTGCGCCGCCCGCACGATGATCGCCGACGTGGAGCCGGTCGTGCGGATCGCCGAGGAGGTGGGGATCCGGATCGAGGCGGCCACGTTCATCGGCTCTTCGCCCATCCGCCAGTACGCCGAGGACTGGACCGTCGAGCGGATCCTGCGGTCCACCGAGGAGGCGGTCACGTTCGCGGTCCGGCACGGCCTGCCCGTCATGTACGTCACCGAGGACACGACGCGGGCGCGACCGGAAACGCTGCAGCGGCTGTACGGCGCCGCCATCGACTGCGGCGCCACGCGCATATGCCTCGCGGATACCGTTGGCCATGCAACGCCGGATGGGGTAAAGGCGTTAGTCGAATTCGTAAAGAGAGAAATCGTAGGGAAAAAAGACGTACAGATCGACTGGCATGGTCACCGGGACAGAGGGATGGGCCTAATCAACTGCCTGGCGGCCATCGAGGCCGGGGTGGACCGCGTGCATGCCACCGCGCTCGGCGTAGGGGAGCGGGTGGGCAATGCCGAGATGGACCTGCTGATCGTCAACCTCAAGCTGCTCGGCGCCTACCGGCACGACCTCTCCAGGCTCCCCGAGTATTGCCGCACTGTGGCGGACGCGGTGGGGATTCCGATTCCCATCAACTATCCCGTGATGGGCACCGACGCCTTCCGCACGGCCACCGGCGTGCATGCGGCGGCGATTATCAAGGCCAAGAAAAAGGGCCATACCTGGCTCGCGGACCGGGTGTACAGCTCGGTGCCGGCGCAGGAGCTCGGGCTCGAGCAGAAGATTGACATCTCGCCCGTCTCCGGTCTCTCCAACGTGAAGTTCTGGCTGGAGACCCACGGCTATGACGCGGACGACGAGGCCGCCTGCAAAGCCCTGTTCGAGGCCGCCAAACAGACGGACCGCGCGCTGACCGACGAGGAGTGCCACCGGCTGCTGAAACAGGCCGCATGGCGGTAA
PROTEIN sequence
Length: 413
MDERELIYDWNKAPGGGRFDWARARVDLNDETLRDGLQSPSVRDPSLEVKRRLLHLMADLGIVAADIGLPGAGPRVVEQVRVLAREIRDHNLPIFPNCAARTMIADVEPVVRIAEEVGIRIEAATFIGSSPIRQYAEDWTVERILRSTEEAVTFAVRHGLPVMYVTEDTTRARPETLQRLYGAAIDCGATRICLADTVGHATPDGVKALVEFVKREIVGKKDVQIDWHGHRDRGMGLINCLAAIEAGVDRVHATALGVGERVGNAEMDLLIVNLKLLGAYRHDLSRLPEYCRTVADAVGIPIPINYPVMGTDAFRTATGVHAAAIIKAKKKGHTWLADRVYSSVPAQELGLEQKIDISPVSGLSNVKFWLETHGYDADDEAACKALFEAAKQTDRALTDEECHRLLKQAAWR*