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13_1_40cm_scaffold_2728

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_2728_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2..1009)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A7Y2_NATTJ id=5225626 bin=16ft_combo_ws3_JS1 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_40cm_scaffold_2728_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1000..2238)
DNA (1239bp) protein (413aa)
leuA3; 2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
2-isopropylmalate synthase Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_40cm_scaffold_2728_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2327..3559
DNA (1233bp) protein (411aa)
Peptidase dimerization domain protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RJ90_9PROT
peptidase M20
Peptidase M20 {ECO:0000313|EMBL:AHG91478.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_2728_4
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3576..4556)
DNA (981bp) protein (327aa)
Metallophosphoesterase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q479C7_DECAR
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:AAZ48554.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatic
13_1_40cm_scaffold_2728_5
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(4553..5035)
DNA (483bp) protein (161aa)
Peroxiredoxin n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TKC1_9CYAN
peroxiredoxin
Peroxiredoxin {ECO:0000313|EMBL:AFY82469.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
13_1_40cm_scaffold_2728_6
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(5055..6641)
DNA (1587bp) protein (529aa)
Multidrug resistance protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R1_GEMAT
multidrug resistance protein
Multidrug resistance protein {ECO:0000313|EMBL:BAH37571.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (stra
13_1_40cm_scaffold_2728_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6649..7701)
DNA (1053bp) protein (351aa)
secretion protein HlyD n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B66708
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:AHG89973.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_2728_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7763..9118)
DNA (1356bp) protein (452aa)
Outer membrane efflux protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5R3_GEMAT
outer membrane efflux protein
Outer membrane efflux protein {ECO:0000313|EMBL:AHG89974.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_40cm_scaffold_2728_9
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9099..9746)
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E19934
TetR family transcriptional regulator {ECO:0000313|EMBL:KIF81779.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="He
bacterial regulatory s, tetR family protein
13_1_40cm_scaffold_2728_10
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

comp(9840..10346)
DNA (507bp) protein (169aa)
DinB family protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFF0_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
hypothetical protein
13_1_40cm_scaffold_2728_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10469..11458)
DNA (990bp) protein (330aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABC1_GEMAT
Nucleotidyl transferase
13_1_40cm_scaffold_2728_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11459..11785)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABC2_GEMAT
cupin domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cupin 2 conserved barrel domain protein
Displaying 12 items

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