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RifSed_csp1_16ft_4_scaffold_4169

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RifSed_csp1_16ft_4_scaffold_4169_trna_2
unknown

Not on your lists

comp(1..75)
-----------------
DNA (75bp)
transferRNA Glu
RifSed_csp1_16ft_4_scaffold_4169_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(116..802)
-----------------
DNA (687bp)
protein (229aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI000369A72A
Na+/solute symporter
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_2
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(865..1623)
-----------------
DNA (759bp)
protein (253aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003780283
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(1801..2592)
-----------------
DNA (792bp)
protein (264aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI0003618409
translation initiation factor 2, alpha subunit
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_4
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(2589..2768)
-----------------
DNA (180bp)
protein (60aa)
30S ribosomal protein S27e Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=RS27_PYRAB
rps27e; 30S ribosomal protein S27e
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2765..3373)
-----------------
DNA (609bp)
protein (203aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F015E
rpl44e; 50S ribosomal protein L44e
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RifSed_csp1_16ft_4_scaffold_4169_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

3633..3998
-----------------
DNA (366bp)
protein (122aa)
Transcriptional regulator, TrmB Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5S4_9EURY
transcriptional regulator, TrmB
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(3991..4677)
-----------------
DNA (687bp)
protein (229aa)
rpiA; ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A Tax=Gloeobacter kilaueensis JS1 RepID=U5QS13_9CYAN
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_8
unknown

Not on your lists

comp(4677..4802)
-----------------
DNA (126bp)
protein (42aa)

This feature has no annotations

RifSed_csp1_16ft_4_scaffold_4169_9
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

4893..5564
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein Tax=Euryarchaeota RepID=M9SHH4_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_trna_1
unknown

Not on your lists

comp(5571..5645)
-----------------
DNA (75bp)
transferRNA Pro
RifSed_csp1_16ft_4_scaffold_4169_10
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(5830..6795)
-----------------
DNA (966bp)
protein (322aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D7D20
NAD-dependent epimerase/dehydratase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_11
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists


comp(6792..7349)
-----------------
DNA (558bp)
protein (186aa)
Non-canonical purine NTP pyrophosphatase Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A358_THEGJ
putative deoxyribonucleotide triphosphate pyrophosphatase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(7346..7771)
-----------------
DNA (426bp)
protein (142aa)
hypothetical protein Tax=Methanomassiliicoccus luminyensis RepID=UPI00037E55C1
serine/threonine protein kinase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_13
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(7842..9857)
-----------------
DNA (2016bp)
protein (672aa)
Putative helicase Tax=uncultured archaeon RepID=D1JIC7_9ARCH
ATP dependent helicase
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_14
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

9985..10722
-----------------
DNA (738bp)
protein (246aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
RifSed_csp1_16ft_4_scaffold_4169_15
unknown

Not on your lists

10763..10855
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

Displaying 17 items

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