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13_1_20cm_2_scaffold_16129_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_2_scaffold_16129_curated_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1..210
DNA (210bp) protein (70aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_16129_curated_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(155..562)
DNA (408bp) protein (136aa)
Putative transcriptional regulator n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T9T6_9EURY
putative transcriptional regulator
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_2_scaffold_16129_curated_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(704..1132)
DNA (429bp) protein (143aa)
id=4002234 bin=GWC2_Nitrospirae_57_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
carbon monoxide dehydrogenase subunit G
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_16129_curated_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(1265..1453)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U951_9EURY
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_16129_curated_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1698..1865
DNA (168bp) protein (56aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_16129_curated_6
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1908..3317
DNA (1410bp) protein (470aa)
Putative FAD binding domain protein id=2130674 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW141A21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
FAD linked oxidase
Tax=GWD2_Deltaproteobacteria_55_8_curated
13_1_20cm_2_scaffold_16129_curated_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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3465..3791
DNA (327bp) protein (109aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_2_scaffold_16129_curated_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3801..4112
DNA (312bp) protein (104aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_16129_curated_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(4197..5300)
DNA (1104bp) protein (368aa)
Putative uncharacterized protein id=4757023 bin=GWC2_Chloroflexi_73_18 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
glycoside hydrolase family protein
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_2_scaffold_16129_curated_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5575..6453
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C210_SPHTD
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_16129_curated_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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6531..6965
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036BE102
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_2_scaffold_16129_curated_12
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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6972..7247
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TAK5_ACIB4
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_2_scaffold_16129_curated_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7298..7831
DNA (534bp) protein (178aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_16129_curated_14
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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7859..8275
DNA (417bp) protein (139aa)
ELP3 component of the RNA polymerase II complex, consists of an N-terminal BioB/LipA-like domain and a C-terminal histone acetylase domain n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TWI2_METKA
ELP3; RNA polymerase II complex ELP3 subunit
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_2_scaffold_16129_curated_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8350..8754
DNA (405bp) protein (135aa)
histone acetyltransferase, ELP3 family (EC:2.3.1.48)
Histone acetyltransferase, ELP3 family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH57_ACIB4
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_2_scaffold_16129_curated_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

8763..9314
DNA (552bp) protein (184aa)
histone acetyltransferase, ELP3 family (EC:2.3.1.48)
Histone acetyltransferase, ELP3 family n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IH57_ACIB4
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_2_scaffold_16129_curated_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(9315..9416)
DNA (102bp) protein (34aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 17 items

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