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13_1_20cm_4_scaffold_1788_curated

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1788_curated_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1..543
DNA (543bp) protein (181aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AF00_PYRYC
glutamyl-tRNA(Gln) amidotransferase subunit D
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1788_curated_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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601..1062
DNA (462bp) protein (154aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1788_curated_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(1059..1361)
DNA (303bp) protein (101aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_1788_curated_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1471..1920
DNA (450bp) protein (150aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1788_curated_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1946..3832
DNA (1887bp) protein (629aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036F5F48
glutamyl-tRNA(Gln) amidotransferase subunit E
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1788_curated_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3947..4768
DNA (822bp) protein (274aa)
D-aminopeptidase n=2 Tax=Streptomyces RepID=D6ASI7_STRFL
D-aminopeptidase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1788_curated_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4933..5334
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C89D9
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1788_curated_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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5412..5741
DNA (330bp) protein (110aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1788_curated_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(5744..6535)
DNA (792bp) protein (264aa)
dehydrogenase/reductase sdr family member 4 (EC:1.1.1.184)
Short-chain dehydrogenase/reductase id=1773283 bin=GWD2_Deltaproteobacteria_55_8 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1788_curated_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(6582..7409)
DNA (828bp) protein (276aa)
GNAT family acetyltransferase n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0FDF1_9BURK
Predicted acetyltransferase
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1788_curated_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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7496..8842
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035DF04E
replication factor A
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1788_curated_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8842..9555
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003732310
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1788_curated_13
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(9565..10056)
DNA (492bp) protein (164aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1788_curated_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10415..11161
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368BEE9
RecA-superfamily ATPase possibly involved in signal transduction
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1788_curated_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

11198..11920
DNA (723bp) protein (241aa)
circadian clock protein, KaiC (EC:2.7.11.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003654B7E
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1788_curated_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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11995..12555
DNA (561bp) protein (187aa)
ThiJ/PfpI domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5P3_SPHTD
ThiJ/PfpI domain-containing protein
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1788_curated_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

12652..13557
DNA (906bp) protein (302aa)
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003718A8D
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1788_curated_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13642..14514
DNA (873bp) protein (291aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGB9_ARCPA
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1788_curated_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

14576..15685
DNA (1110bp) protein (370aa)
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA synthetase, beta subunit n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TWV4_9EURY
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1788_curated_20
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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15687..16550
DNA (864bp) protein (288aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U006_9EURY
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_1788_curated_21
Alicyclobacillus acidoterrestris, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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16639..18120
DNA (1482bp) protein (494aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0BGF1_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EPZ43033.1}; TaxID=1356854 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidoterrestris ATCC 49025.;"
cytosine/purines uracil thiamine allantoin permease
13_1_20cm_4_scaffold_1788_curated_22
unknown

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18117..18206
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 22 items

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