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13_1_20cm_4_scaffold_3483_curated

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3483_curated_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..521)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037F1305
cytosine deaminase-like metal-dependent hydrolase
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_3483_curated_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

652..1578
DNA (927bp) protein (309aa)
Endonuclease V n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7T3B2_9EURY
O-6-methylguanine DNA methyltransferase
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_3483_curated_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1900..2658
DNA (759bp) protein (253aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=1 Tax=Halobacterium sp. DL1 RepID=G4IFJ9_9EURY
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_3483_curated_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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2733..3281
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000371F3A4
transcription factor
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_3483_curated_5
BJP_S1_SUB10_Syntrophobacterales_50_21, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3285..3749
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037AFA78
Activator of Hsp90 ATPase 1 family protein
Tax=BJP_S1_SUB10_Syntrophobacterales_50_21
13_1_20cm_4_scaffold_3483_curated_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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3774..4607
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037BF30C
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_3483_curated_7
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(4630..4905)
DNA (276bp) protein (92aa)
hypothetical protein n=2 Tax=unclassified candidate division pSL4 RepID=UPI0003634384
acylphosphatase
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_3483_curated_8
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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4925..5743
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Nocardiopsis halotolerans RepID=UPI00034B193F
type 11 methyltransferase
Tax=RBG_16_Chloroflexi_68_14_curated
13_1_20cm_4_scaffold_3483_curated_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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5824..6975
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037F6550
hypothetical protein
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_3483_curated_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(6906..7922)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00037E86E2
histone deacetylase
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_3483_curated_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8106..9260
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI000375234E
PKD domain-containing protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_3483_curated_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

9412..9849
DNA (438bp) protein (146aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_3483_curated_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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9890..10438
DNA (549bp) protein (183aa)
GCN5-related N-acetyltransferase n=1 Tax=uncultured prokaryote RepID=H5SCN9_9ZZZZ
N-acetyltransferase GCN5
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_3483_curated_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(10445..11536)
DNA (1092bp) protein (364aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035C9FA3
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_3483_curated_15
unknown

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comp(11595..11795)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_4_scaffold_3483_curated_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

11881..12222
DNA (342bp) protein (114aa)
ribonuclease p protein subunit rpp21 (EC:3.1.26.5)
Ribonuclease P protein component 4 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXE4_METFV
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_3483_curated_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12219..13076)
DNA (858bp) protein (286aa)
Putative ABC transporter permease protein id=1699494 bin=GWB2_Chloroflexi_49_20 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
ABC transporter permease
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_3483_curated_18
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13073..13996)
DNA (924bp) protein (308aa)
ABC-2 type transport system protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SQX1_9BACT
ABC transporter
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_3483_curated_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13993..15003)
DNA (1011bp) protein (337aa)
Antibiotic transport system ATP-binding protein id=1250161 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
putative ABC transporter ATP-binding protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_3483_curated_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15053..15280)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037E58BB
rps17E; 30S ribosomal protein S17e
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 20 items

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