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13_1_20cm_4_scaffold_646_curated

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_646_curated_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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1..702
DNA (702bp) protein (234aa)
Tetratricopeptide repeat protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CGZ1_9GAMM
anaphase-promoting complex, cyclosome, subunit 3
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_646_curated_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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747..977
DNA (231bp) protein (77aa)
50S ribosomal protein L18Ae n=2 Tax=Euryarchaeota RepID=M9SDR5_9EURY
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_646_curated_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

974..1420
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003725F6E
prefoldin subunit alpha
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_646_curated_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

1421..2353
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003623685
signal recognition particle-docking protein FtsY
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_646_curated_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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2355..2951
DNA (597bp) protein (199aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_646_curated_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2954..3331
DNA (378bp) protein (126aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_646_curated_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(3335..4021)
DNA (687bp) protein (229aa)
Glycosyl transferase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HK42_ACIS0
glycosyl transferase
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_646_curated_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4063..4845)
DNA (783bp) protein (261aa)
Glycosyl transferase family 2 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IA35_ACIB4
glycosyl transferase family 2
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_646_curated_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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4871..6031
DNA (1161bp) protein (387aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360B956
UDP-N-acetylglucosamine 2-epimerase
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_646_curated_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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6028..7035
DNA (1008bp) protein (336aa)
Glycosyl transferase family protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SH25_9BACT
Glycosyl transferase, group 1
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_646_curated_11
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

7331..8254
DNA (924bp) protein (308aa)
UDP-glucose 6-dehydrogenase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z1B6_METPS
ugd; UDP-glucose 6-dehydrogenase
Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
13_1_20cm_4_scaffold_646_curated_12
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(8289..9407)
DNA (1119bp) protein (373aa)
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase id=5241071 bin=GW2011_AR10_complete species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Chloroflexi_50_9_curated
13_1_20cm_4_scaffold_646_curated_13
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

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comp(9404..10354)
DNA (951bp) protein (317aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5UZ82_ROSS1
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ABQ91935.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
13_1_20cm_4_scaffold_646_curated_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(10347..11210)
DNA (864bp) protein (288aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
UDP-glucose pyrophosphorylase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VL0_METBU
UTP--glucose-1-phosphate uridylyltransferase
13_1_20cm_4_scaffold_646_curated_15
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(11316..12266)
DNA (951bp) protein (317aa)
Putative glycosyltransferase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I316_CALAS
putative glycosyltransferase
Tax=CG_Anaero_02
13_1_20cm_4_scaffold_646_curated_16
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12342..13184
DNA (843bp) protein (281aa)
Putative glycosyltransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z259_METPS
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:BAI62781.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 /; SANAE).;"
13_1_20cm_4_scaffold_646_curated_17
Methanotorris igneus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(13168..13824)
DNA (657bp) protein (219aa)
Methyltransferase type 11 n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAX6_METIK
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:AEF97063.1}; TaxID=880724 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5).;"
13_1_20cm_4_scaffold_646_curated_18
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

comp(13831..15594)
DNA (1764bp) protein (588aa)
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase
CDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase id=5241146 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=RBG_16_Chloroflexi_64_32_curated
13_1_20cm_4_scaffold_646_curated_19
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

15714..16685
DNA (972bp) protein (324aa)
UDP-N-acetylglucosamine 4,6-dehydratase n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BV80_ANAMD
UDP-N-acetylglucosamine 4,6-dehydratase
Tax=RBG_16_Chloroflexi_64_32_curated
13_1_20cm_4_scaffold_646_curated_20
Anaerobaculum mobile, Anaerobaculum, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

16682..17422
DNA (741bp) protein (247aa)
Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase n=1 Tax=Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA) RepID=I4BV82_ANAMD
spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase
Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase {ECO:0000313|EMBL:AFM21189.1}; TaxID=891968 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Anaerobaculum.;" source="Anaerobaculum mobile (strain ATCC BAA-54 / DSM 13181 / NGA).;"
13_1_20cm_4_scaffold_646_curated_21
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(17447..18385)
DNA (939bp) protein (313aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase id=4155239 bin=GWF2_Lentisphaerae_52_8 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
13_1_20cm_4_scaffold_646_curated_22
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(18382..19488)
DNA (1107bp) protein (369aa)
atm:ANT_06360 putative N-acetylneuraminate synthase; K01654 N-acetylneuraminate synthase [EC:2.5.1.56] id=1244733 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
putative N-acetylneuraminate synthase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
13_1_20cm_4_scaffold_646_curated_23
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(19493..20413)
DNA (921bp) protein (307aa)
rmlD; putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133); K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] id=1244732 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
rmlD; putative dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
13_1_20cm_4_scaffold_646_curated_24
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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comp(20410..21438)
DNA (1029bp) protein (343aa)
Glycosyl transferase group 1 n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0MY05_9EURY
group 1 glycosyl transferase
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_4_scaffold_646_curated_25
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21626..22231)
DNA (606bp) protein (202aa)
Methyltransferase domain protein id=3435977 bin=GWC2_Elusimicrobia_64_44 species=unknown genus=Leptospira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
13_1_20cm_4_scaffold_646_curated_26
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

22688..23311
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035F4B81
chromosome segregation protein SMC
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 26 items

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