ggKbase home page

13_1_20cm_4_scaffold_820_curated

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_820_curated_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(2..340)
DNA (339bp) protein (113aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_820_curated_2
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(411..1895)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K2B7_DEHLB
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_820_curated_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1892..2923)
DNA (1032bp) protein (344aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_820_curated_4
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(2920..4086)
DNA (1167bp) protein (389aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_820_curated_5
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4025..5182)
DNA (1158bp) protein (386aa)
exonuclease SbcC n=1 Tax=Thermus islandicus RepID=UPI0003B66A5A
DNA repair ATPase
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_820_curated_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(5179..6369)
DNA (1191bp) protein (397aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_820_curated_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(6450..7661)
DNA (1212bp) protein (404aa)
glycine/D-amino acid oxidase, deaminating id=14631966 bin=bin9_gal15 species=Mycobacterium tusciae genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15
FAD dependent oxidoreductase
Tax=CSP1_3_Armatimonadetes
13_1_20cm_4_scaffold_820_curated_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7771..8682
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003788A92
Cell division protein ftsZ
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_820_curated_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

8718..9557
DNA (840bp) protein (280aa)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46EG1_METBF
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_820_curated_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

9576..10595
DNA (1020bp) protein (340aa)
3-dehydroquinate synthase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7Y5_9EURY
3-dehydroquinate synthase II
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_820_curated_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10597..12081
DNA (1485bp) protein (495aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036C03B7
hypothetical protein
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_820_curated_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

12078..12935
DNA (858bp) protein (286aa)
Shikimate kinase II (EC:2.7.1.71)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D1224
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_820_curated_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12932..14203
DNA (1272bp) protein (424aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B26C2
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Displaying 13 items

View Taxonomy