ggKbase home page

A1-18-all-fractions_k255_1168196

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1168196_1
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1051
DNA (1050bp) protein (350aa)
Amidase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJS1_BEII9
amidase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
A1-18-all-fractions_k255_1168196_2
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1113..2225)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R9Y2_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79486.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_1168196_3
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2473..4539
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RB72_PHEZH
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
A1-18-all-fractions_k255_1168196_4
Pseudomonas sp., Proteobacteria, Bacteria

Not on your lists

4627..6570
DNA (1944bp) protein (648aa)
Polyvinylalcohol dehydrogenase; Short=PVA dehydrogenase;; Short=PVADH;; EC=1.1.2.6;; Polyvinyl alcohol dehydrogenase (cytochrome); Flags: Precursor;; TaxID=306 species="Bacteria; Proteobacteria.;" source="Pseudomonas sp.;"
Polyvinylalcohol dehydrogenase n=1 Tax=Pseudomonas sp. RepID=PVADH_PSESP
polyvinyl-alcohol dehydrogenase
A1-18-all-fractions_k255_1168196_5
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6533..7432)
DNA (900bp) protein (300aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U8B7_METS4
carbohydrate kinase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
A1-18-all-fractions_k255_1168196_6
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7447..8211)
DNA (765bp) protein (255aa)
Putative phosphoglycerate mutase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9P1_AZOL4
putative phosphoglycerate mutase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
A1-18-all-fractions_k255_1168196_7
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8273..8725)
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003AAD997
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
A1-18-all-fractions_k255_1168196_8
Sphingomonas sp. Ant20, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8806..10608)
DNA (1803bp) protein (601aa)
Tat pathway signal protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B75A74
Tat pathway signal protein {ECO:0000313|EMBL:KHA63881.1}; TaxID=104605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. Ant20.;"
hypothetical protein
A1-18-all-fractions_k255_1168196_9
unknown

Not on your lists

comp(10697..10939)
DNA (243bp) protein (81aa)

This feature has no annotations

A1-18-all-fractions_k255_1168196_10
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11000..11617)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003614735
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ72722.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
A1-18-all-fractions_k255_1168196_11
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11622..12077)
DNA (456bp) protein (152aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC38_PHEZH
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
A1-18-all-fractions_k255_1168196_12
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12074..13261)
DNA (1188bp) protein (396aa)
DNA/pantothenate metabolism flavoprotein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC39_PHEZH
dfp; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
DNA/pantothenate metabolism flavoprotein {ECO:0000313|EMBL:ACG79832.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_1168196_13
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13457..14050
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC40_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79833.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_1168196_14
unknown

Not on your lists

comp(14047..14355)
DNA (309bp) protein (103aa)

This feature has no annotations

A1-18-all-fractions_k255_1168196_15
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14385..15893)
DNA (1509bp) protein (503aa)
Probable protein kinase UbiB {ECO:0000256|SAAS:SAAS00063507}; EC=2.7.-.- {ECO:0000256|SAAS:SAAS00063486};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Ubiquinone biosynthesis protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC41_PHEZH
aarF; ubiquinone biosynthesis protein
A1-18-all-fractions_k255_1168196_16
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15913..16671)
DNA (759bp) protein (253aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000255|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000255|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000255|HAMAP-Rule:MF_01813};; 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase {ECO:0000255|HAMAP-Rule:MF_01813}; Demethylmenaquinone methyltransferase {ECO:0000255|HAMAP-Rule:MF_01813}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=UBIE_PHEZH
ubiE; ubiquinone/menaquinone biosynthesis methlytransferase UbiE
A1-18-all-fractions_k255_1168196_17
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16736..17614
DNA (879bp) protein (293aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00103}; Short=Fapy-DNA glycosylase {ECO:0000255|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000255|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000255|HAMAP-Rule:MF_00103}; Short=AP lyase MutM {ECO:0000255|HAMAP-Rule:MF_00103};; EC=4.2.99.18 {ECO:0000255|HAMAP-Rule:MF_00103};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Formamidopyrimidine-DNA glycosylase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=FPG_PHEZH
mutM; formamidopyrimidine-DNA glycosylase
A1-18-all-fractions_k255_1168196_18
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17614..18492
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC44_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79837.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_1168196_19
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18526..19314
DNA (789bp) protein (263aa)
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC45_PHEZH
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase family protein {ECO:0000313|EMBL:ACG79838.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_1168196_20
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19430..19699
DNA (270bp) protein (90aa)
30S ribosomal protein S20 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RS20_PHEZH
rpsT; 30S ribosomal protein S20
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
A1-18-all-fractions_k255_1168196_21
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20102..21565
DNA (1464bp) protein (488aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC47_PHEZH
dnaA; chromosomal replication initiation protein
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_1168196_22
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21638..21997
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Caulobacter crescentus (strain NA1000 / CB15N) RepID=M9WKL5_CAUCN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79449.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_1168196_23
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22067..24205)
DNA (2139bp) protein (713aa)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=PNP_PHEZH
pnp; polynucleotide phosphorylase
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
A1-18-all-fractions_k255_1168196_24
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24420..24689)
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RS15_PHEZH
rpsO; 30S ribosomal protein S15
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
A1-18-all-fractions_k255_1168196_25
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24661..25638)
DNA (978bp) protein (326aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
tRNA pseudouridine synthase B n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC50_PHEZH
truB; tRNA pseudouridine synthase B
A1-18-all-fractions_k255_1168196_26
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25638..26090)
DNA (453bp) protein (151aa)
Ribosome-binding factor A n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=RBFA_PHEZH
rbfA; ribosome-binding factor A
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
A1-18-all-fractions_k255_1168196_27
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26198..26983)
DNA (786bp) protein (262aa)
Dienelactone hydrolase family protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC52_PHEZH
dienelactone hydrolase
Dienelactone hydrolase family protein {ECO:0000313|EMBL:ACG79845.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_1168196_28
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27027..27533)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC53_PHEZH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG79846.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_1168196_29
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27600..28379)
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Caulobacter crescentus (strain ATCC 19089 / CB15) RepID=Q9AAM7_CAUCR
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
A1-18-all-fractions_k255_1168196_30
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28472..28978
DNA (507bp) protein (169aa)
Acetyltransferase, GNAT family n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RC54_PHEZH
acetyltransferase, GNAT family
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ACG79847.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Displaying items 1-30 of 31 in total

View Taxonomy