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A1-18-all-fractions_k255_770465

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_770465_1
Oryza sativa, Oryza, Poales, commelinids, Streptophyta, Viridiplantae

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2..913
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Oryza sativa subsp. indica RepID=A2XFW3_ORYSI
Putative uncharacterized protein {ECO:0000313|EMBL:EAY89723.1}; TaxID=39946 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza.;" source="Oryza sativa subsp. indica (Rice).;"
hypothetical protein
A1-18-all-fractions_k255_770465_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1155..1757
DNA (603bp) protein (201aa)
Hopanoid biosynthesis associated membrane protein HpnM n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7H8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO40247.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hopanoid biosynthesis associated membrane protein HpnM
A1-18-all-fractions_k255_770465_3
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1729..4353)
DNA (2625bp) protein (875aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0003094874
Uncharacterized protein {ECO:0000313|EMBL:GAO40241.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hopanoid biosynthesis associated RND transporter-like protein HpnN
A1-18-all-fractions_k255_770465_4
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4363..5211)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Caulobacter RepID=UPI000360DDFB
VacJ lipoprotein {ECO:0000313|EMBL:GAO55500.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
VacJ family lipoprotein
A1-18-all-fractions_k255_770465_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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5378..6289
DNA (912bp) protein (304aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI0003809C0B
Phosphotransferase enzyme family, putative {ECO:0000313|EMBL:GAK43853.1}; TaxID=1333998 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
aminoglycoside phosphotransferase
A1-18-all-fractions_k255_770465_6
unknown

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comp(6286..6435)
DNA (150bp) protein (50aa)

This feature has no annotations

A1-18-all-fractions_k255_770465_7
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6435..7244)
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI00036A5712
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
A1-18-all-fractions_k255_770465_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7260..8474)
DNA (1215bp) protein (405aa)
LuxA n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EE5201
LuxA {ECO:0000313|EMBL:ETW92941.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
LuxA-like protein
A1-18-all-fractions_k255_770465_9
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8555..9088)
DNA (534bp) protein (178aa)
thiol-disulfide isomerase n=1 Tax=Sphingomonas elodea RepID=UPI00026308EB
thiol-disulfide isomerase
Thiol-disulfide isomerase {ECO:0000313|EMBL:AIT06666.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
A1-18-all-fractions_k255_770465_10
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9148..9834)
DNA (687bp) protein (229aa)
RNA polymerase sigma factor n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RD59_PHEZH
RNA polymerase sigma-70 factor,ECF subfamily
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
A1-18-all-fractions_k255_770465_11
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9963..10484
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037110A9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL12507.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
A1-18-all-fractions_k255_770465_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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10481..10798
DNA (318bp) protein (106aa)
Putative amicyanin protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B4L2_RHILS
Uncharacterized protein {ECO:0000313|EMBL:KGM34700.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
putative amicyanin protein
A1-18-all-fractions_k255_770465_13
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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11070..11417
DNA (348bp) protein (116aa)
Transcriptional regulator(CAMP-binding) n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4R882_PHEZH
transcriptional regulator
Transcriptional regulator(CAMP-binding) {ECO:0000313|EMBL:ACG79200.1}; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
Displaying 13 items

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