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A1-18-all-fractions_k255_1353467

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1353467_1
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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173..2692
DNA (2520bp) protein (840aa)
Translation initiation factor IF-2 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9UTD6_9SPHN
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
infB; translation initiation factor IF-2
A1-18-all-fractions_k255_1353467_2
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2801..3193
DNA (393bp) protein (131aa)
ribosome-binding factor A n=1 Tax=Sphingomonas elodea RepID=UPI000263031D
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
rbfA; ribosome-binding factor A
A1-18-all-fractions_k255_1353467_3
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3266..3823
DNA (558bp) protein (186aa)
N-acetyltransferase GCN5 n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S439_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE56987.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
N-acetyltransferase GCN5
A1-18-all-fractions_k255_1353467_4
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3922..4539
DNA (618bp) protein (206aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
Thymidine kinase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GVR3_SPHAL
thymidine kinase
A1-18-all-fractions_k255_1353467_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4620..5552
DNA (933bp) protein (311aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
tRNA pseudouridine synthase B n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IQ16_9SPHN
truB; tRNA pseudouridine synthase B
A1-18-all-fractions_k255_1353467_6
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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5571..5840
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Sphingomonas RepID=UPI0002630321
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
30S ribosomal protein S15
A1-18-all-fractions_k255_1353467_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6002..8365
DNA (2364bp) protein (788aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
polynucleotide phosphorylase n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI000362926B
polynucleotide phosphorylase/polyadenylase
A1-18-all-fractions_k255_1353467_8
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8428..9207)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI000380232A
Uncharacterized protein {ECO:0000313|EMBL:ETI65514.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
hypothetical protein
A1-18-all-fractions_k255_1353467_9
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9365..10216)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2DK50_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK83297.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
hypothetical protein
A1-18-all-fractions_k255_1353467_10
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10338..10907)
DNA (570bp) protein (190aa)
Isochorismatase hydrolase n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9H559_GLUDA
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:CAP54291.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 /; PAl5).;"
A1-18-all-fractions_k255_1353467_11
unknown

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comp(11005..11280)
DNA (276bp) protein (92aa)

This feature has no annotations

A1-18-all-fractions_k255_1353467_12
Oncorhynchus mykiss, Oncorhynchus, Salmoniformes, Neopterygii, Chordata, Metazoa

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11460..12356
DNA (897bp) protein (299aa)
PREDICTED: transmembrane protease serine 4 n=1 Tax=Chrysemys picta bellii RepID=UPI000388EB4F
Oncorhynchus mykiss genomic scaffold, scaffold_8272 {ECO:0000313|EMBL:CDQ91970.1}; TaxID=8022 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.;" source="Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).;"
peptidase S1 and S6, chymotrypsin/Hap
A1-18-all-fractions_k255_1353467_13
unknown

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comp(12353..12553)
DNA (201bp) protein (67aa)

This feature has no annotations

A1-18-all-fractions_k255_1353467_14
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12624..14546)
DNA (1923bp) protein (641aa)
hypothetical protein n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI00030BE51E
Uncharacterized protein {ECO:0000313|EMBL:KEO96756.1}; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
adenylate cyclase protein
Displaying 14 items

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