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A1-18-all-fractions_k255_2588932

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_2588932_1
unknown

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1..297
DNA (297bp) protein (99aa)

This feature has no annotations

A1-18-all-fractions_k255_2588932_2
Erythrobacter litoralis, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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309..857
DNA (549bp) protein (183aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=39960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter litoralis.;"
shikimate kinase (EC:2.7.1.71)
UPI0003CFD3FB related cluster n=1 Tax=unknown RepID=UPI0003CFD3FB
A1-18-all-fractions_k255_2588932_3
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(854..2650)
DNA (1797bp) protein (599aa)
sodium/hydrogen exchanger n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248855C
Sodium:proton exchanger {ECO:0000313|EMBL:KKC24417.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
sodium/hydrogen exchanger
A1-18-all-fractions_k255_2588932_4
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2643..3071)
DNA (429bp) protein (143aa)
Iron-sulfur cluster biosynthesis protein, NifU-like protein n=1 Tax=Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 RepID=V5Q2X0_ZYMMB
iron-sulfur cluster biosynthesis protein, NifU-like protein
NifU-like involved in Fe-S cluster formation {ECO:0000313|EMBL:AAV89215.1}; TaxID=264203 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;" source="Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4).;"
A1-18-all-fractions_k255_2588932_5
alpha proteobacterium JLT2015, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3068..4375)
DNA (1308bp) protein (436aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1234595 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium JLT2015.;"
Cysteine--tRNA ligase n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U3W2_9PROT
cysS; cysteinyl-tRNA synthetase
A1-18-all-fractions_k255_2588932_6
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4372..4899)
DNA (528bp) protein (176aa)
Putative membrane protein, required for colicin V production n=1 Tax=Sphingobium sp. AP49 RepID=J2WLH4_9SPHN
Putative membrane protein, required for colicin V production {ECO:0000313|EMBL:EJK83748.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
cvpA; membrane protein required for colicin V production
A1-18-all-fractions_k255_2588932_7
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4943..6256)
DNA (1314bp) protein (438aa)
Drug resistance transporter, EmrB/QacA subfamily, putative n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LFR2_BURGS
Multidrug MFS transporter {ECO:0000313|EMBL:KGE08497.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
sugar (and other) transporter family protein
A1-18-all-fractions_k255_2588932_8
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6428..7159)
DNA (732bp) protein (244aa)
type 12 methyltransferase n=1 Tax=Sphingomonas wittichii RepID=UPI0002FDA807
Uncharacterized protein {ECO:0000313|EMBL:AHE55854.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
type 12 methyltransferase
A1-18-all-fractions_k255_2588932_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7264..8301
DNA (1038bp) protein (346aa)
bactoprenol glucosyl transferase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003811FAF
glycosyl transferase family protein
Glycosyl transferase family protein {ECO:0000313|EMBL:AGH49630.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_2588932_10
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8298..9776)
DNA (1479bp) protein (493aa)
DNA repair protein radA n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0H370_9SPHN
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
DNA repair protein RadA
A1-18-all-fractions_k255_2588932_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9808..10986
DNA (1179bp) protein (393aa)
sodium/hydrogen exchanger n=1 Tax=Sphingomonas elodea RepID=UPI00026301B3
Putative CPA1 family transporter {ECO:0000313|EMBL:GAO39698.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
sodium/hydrogen exchanger
A1-18-all-fractions_k255_2588932_12
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11002..12276
DNA (1275bp) protein (425aa)
Major facilitator transporter n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RY70_9SPHN
major facilitator transporter
Major facilitator transporter {ECO:0000313|EMBL:AGH48466.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_2588932_13
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12273..13199
DNA (927bp) protein (309aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
Cysteine synthase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0KEN7_9SPHN
cysK; cysteine synthase
A1-18-all-fractions_k255_2588932_14
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13295..15979
DNA (2685bp) protein (895aa)
diguanylate cyclase n=1 Tax=Sphingomonas wittichii RepID=UPI0002FC9AF1
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABQ70313.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_2588932_15
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15976..17310)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3J2_SPHWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ66858.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_2588932_16
unknown

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comp(17470..17976)
DNA (507bp) protein (169aa)

This feature has no annotations

A1-18-all-fractions_k255_2588932_17
unknown

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comp(18169..18696)
DNA (528bp) protein (176aa)

This feature has no annotations

A1-18-all-fractions_k255_2588932_18
unknown

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comp(18860..19042)
DNA (183bp) protein (61aa)

This feature has no annotations

A1-18-all-fractions_k255_2588932_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19279..21075)
DNA (1797bp) protein (599aa)
Butyryl-CoA dehydrogenase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5L3_9SPHN
butyryl-CoA dehydrogenase
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:AGH51330.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_2588932_20
Pandoraea sp. RB-44, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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21177..21773
DNA (597bp) protein (199aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;"
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI000377E1E2
methionine sulfoxide reductase A
A1-18-all-fractions_k255_2588932_21
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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21879..23327
DNA (1449bp) protein (483aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
amidophosphoribosyltransferase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000380B3BA
A1-18-all-fractions_k255_2588932_22
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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23346..24089
DNA (744bp) protein (248aa)
Oxidoreductase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IN04_9SPHN
Oxidoreductase {ECO:0000313|EMBL:EQB30180.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
short-chain dehydrogenase/reductase SDR
A1-18-all-fractions_k255_2588932_23
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24492..26087
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Robiginitomaculum antarcticum RepID=UPI0003645A46
Uncharacterized protein {ECO:0000313|EMBL:EQA97207.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
integral membrane protein-like protein
A1-18-all-fractions_k255_2588932_24
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26011..27264)
DNA (1254bp) protein (418aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S6E9_9SPHN
cyclopropane-fatty-acyl-phospholipid synthase
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AGH50488.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_2588932_25
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27287..28195)
DNA (909bp) protein (303aa)
Membrane-bound metal-dependent hydrolase n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GSW3_SPHAL
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:KGB54110.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
membrane-bound metal-dependent hydrolase
A1-18-all-fractions_k255_2588932_26
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28208..29218)
DNA (1011bp) protein (337aa)
2-oxoacid ferredoxin oxidoreductase subunit beta n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036EF70D
2-oxoglutarate--ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:GAO39694.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
2-oxoacid:ferredoxin oxidoreductase subunit beta
A1-18-all-fractions_k255_2588932_27
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(29339..30592)
DNA (1254bp) protein (418aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S980_9SPHN
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein {ECO:0000313|EMBL:AGH51059.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Displaying 27 items

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