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A1-18-all-fractions_k255_3290320

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3290320_1

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186..1790
DNA (1605bp) protein (535aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55)
Alpha-L-arabinofuranosidase C-terminus n=1 Tax=uncultured organism RepID=T1W8T4_9ZZZZ
Alpha-L-arabinofuranosidase C-terminus {ECO:0000313|EMBL:AGU11412.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
A1-18-all-fractions_k255_3290320_2
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1833..2249)
DNA (417bp) protein (139aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1)
methylmalonyl-CoA epimerase n=1 Tax=Sphingomonas wittichii RepID=UPI0002ED5FB5
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KKC26122.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
A1-18-all-fractions_k255_3290320_3
Halomonas hydrothermalis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2246..2704)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Halomonas stevensii RepID=UPI00031B74DE
Peroxiredoxin {ECO:0000313|EMBL:KHJ52100.1}; TaxID=115561 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas hydrothermalis.;"
OsmC/Ohr family protein
A1-18-all-fractions_k255_3290320_4
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2711..4243)
DNA (1533bp) protein (511aa)
Propionyl-CoA carboxylase beta chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIX9_9SPHN
Propionyl-CoA carboxylase beta chain {ECO:0000313|EMBL:GAO38818.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
pccB; propionyl-CoA carboxylase subunit beta
A1-18-all-fractions_k255_3290320_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4446..5660
DNA (1215bp) protein (405aa)
UDP-galactopyranose mutase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RE46_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:GAO40916.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
UDP-galactopyranose mutase
A1-18-all-fractions_k255_3290320_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5657..6832
DNA (1176bp) protein (392aa)
UDP-galactopyranose mutase n=1 Tax=Pseudomonas stutzeri DSM 10701 RepID=I7A4K9_PSEST
UDP-galactopyranose mutase
UDP-galactopyranose mutase {ECO:0000313|EMBL:KIL02900.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
A1-18-all-fractions_k255_3290320_7
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6832..9012
DNA (2181bp) protein (727aa)
dTDP-4-dehydrorhamnose reductase (EC:3.2.1.86 1.1.1.133)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000319C8CA
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EIM25124.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
A1-18-all-fractions_k255_3290320_8
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9066..9830
DNA (765bp) protein (255aa)
Putative phosphoglycerate mutase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CRF5_9RHIZ
Phosphoglycerate mutase {ECO:0000313|EMBL:KJB96046.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative phosphoglycerate mutase
A1-18-all-fractions_k255_3290320_9
Methylobacterium radiotolerans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9827..10684
DNA (858bp) protein (286aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=426355 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM; 2831).;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M5K2_METRJ
carbohydrate kinase
A1-18-all-fractions_k255_3290320_10
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10670..12133)
DNA (1464bp) protein (488aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
Pyruvate kinase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SHN7_9SPHN
pyruvate kinase
A1-18-all-fractions_k255_3290320_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12234..12476
DNA (243bp) protein (81aa)
UPF0335 protein L288_19585 n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GHJ6_9SPHN
UPF0335 protein SCH01S_42_00360 {ECO:0000256|HAMAP-Rule:MF_00797}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_3290320_12
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12486..13229
DNA (744bp) protein (248aa)
transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B364B9
Probable transcriptional regulatory protein WSK_0367 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
hypothetical protein
A1-18-all-fractions_k255_3290320_13
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13346..13711
DNA (366bp) protein (122aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
crossover junction endodeoxyribonuclease RuvC n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC4BA
crossover junction endodeoxyribonuclease RuvC
A1-18-all-fractions_k255_3290320_14
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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13724..14314
DNA (591bp) protein (197aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S5A0_9SPHN
ruvA; Holliday junction DNA helicase RuvA
A1-18-all-fractions_k255_3290320_15
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14461..14703
DNA (243bp) protein (81aa)
Glutathione-dependent formaldehyde-activating, GFA n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08MJ8_STIAD
Aldehyde-activating protein {ECO:0000313|EMBL:KJS25878.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
glutathione-dependent formaldehyde-activating protein
A1-18-all-fractions_k255_3290320_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14712..15833)
DNA (1122bp) protein (374aa)
Peptidase M19 family protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S277_9SPHN
peptidase M19 family protein
Peptidase M19 family protein {ECO:0000313|EMBL:AGH50115.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3290320_17
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16044..17087
DNA (1044bp) protein (348aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction DNA helicase RuvB n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI00030BBF60
A1-18-all-fractions_k255_3290320_18
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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17084..18247
DNA (1164bp) protein (388aa)
lysophospholipase n=1 Tax=Oceanicaulis alexandrii RepID=UPI0003B64EBF
Uncharacterized protein {ECO:0000313|EMBL:EAP90610.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
hypothetical protein
A1-18-all-fractions_k255_3290320_19
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18213..18419)
DNA (207bp) protein (69aa)
Transcriptional regulator n=1 Tax=Oceanicaulis sp. HTCC2633 RepID=A3UJY3_9RHOB
Transcriptional regulator {ECO:0000313|EMBL:EAP88972.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
XRE family transcriptional regulator
A1-18-all-fractions_k255_3290320_20
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18412..18858)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SZF2_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ73481.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
A1-18-all-fractions_k255_3290320_21
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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18967..19422
DNA (456bp) protein (152aa)
4-hydroxybenzoyl-CoA thioesterase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SHQ4_9SPHN
4-hydroxybenzoyl-CoA thioesterase
4-hydroxybenzoyl-CoA thioesterase {ECO:0000313|EMBL:AGH50117.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_3290320_22
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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19419..20714
DNA (1296bp) protein (432aa)
translocation protein TolB n=1 Tax=Sphingomonas elodea RepID=UPI00026312EA
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
tol-pal system beta propeller repeat protein TolB
A1-18-all-fractions_k255_3290320_23
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20714..21163
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000366ECE9
Uncharacterized protein {ECO:0000313|EMBL:AHE51843.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
Minor outer membrane protein Omp16
A1-18-all-fractions_k255_3290320_24
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21165..21470)
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248BE8A
Uncharacterized protein {ECO:0000313|EMBL:GAO40514.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_3290320_25
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21549..22385)
DNA (837bp) protein (279aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247611};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247610}; Pantoate-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00158}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Pantothenate synthetase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S2H6_9SPHN
pantothenate synthetase
Displaying 25 items

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