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A1-18-all-fractions_k255_3545237

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3545237_1
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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522..1478
DNA (957bp) protein (319aa)
OOP-family protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YMR3_9SPHN
OOP-family protein {ECO:0000313|EMBL:GAD50060.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
OmpA/MotB domain-containing protein
A1-18-all-fractions_k255_3545237_2
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1558..2349)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IDQ7_BEII9
Uncharacterized protein {ECO:0000313|EMBL:KGQ19270.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
A1-18-all-fractions_k255_3545237_3
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2564..3412
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DUC0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82302.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
hypothetical protein
A1-18-all-fractions_k255_3545237_4
Ficedula albicollis, Ficedula, Passeriformes, Aves, Chordata, Metazoa

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3412..4284
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Ficedula albicollis RepID=U3KGZ0_FICAL
Uncharacterized protein {ECO:0000313|Ensembl:ENSFALP00000014294}; TaxID=59894 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.;" source="Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).;"
hypothetical protein
A1-18-all-fractions_k255_3545237_5
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4304..5323)
DNA (1020bp) protein (340aa)
AraC family transcriptional regulator n=1 Tax=Pseudomonas sp. EGD-AK9 RepID=U2B828_9PSED
putative AraC family transcriptional regulator
Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
A1-18-all-fractions_k255_3545237_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5600..6388)
DNA (789bp) protein (263aa)
OmpA/MotB n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GPJ2_SPHAL
Outer membrane protein A {ECO:0000313|EMBL:GAO56215.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
OmpA/MotB protein
A1-18-all-fractions_k255_3545237_7
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6605..7543
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2DK50_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KGQ19270.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter dokdonensis DS-58.;"
hypothetical protein
A1-18-all-fractions_k255_3545237_8
unknown

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comp(7435..7902)
DNA (468bp) protein (156aa)

This feature has no annotations

A1-18-all-fractions_k255_3545237_9
Phenylobacterium zucineum, Phenylobacterium, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8068..9519
DNA (1452bp) protein (484aa)
AMP nucleosidase {ECO:0000256|HAMAP-Rule:MF_01932}; EC=3.2.2.4 {ECO:0000256|HAMAP-Rule:MF_01932};; TaxID=450851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Phenylobacterium.;" source="Phenylobacterium zucineum (strain HLK1).;"
AMP nucleosidase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDR8_PHEZH
amn; AMP nucleosidase
A1-18-all-fractions_k255_3545237_10
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9542..11245)
DNA (1704bp) protein (568aa)
5'-nucleotidase family protein precursor (EC:3.1.3.5)
Putative 5'-nucleotidase {ECO:0000313|EMBL:CAL61647.1}; EC=3.1.3.5 {ECO:0000313|EMBL:CAL61647.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas arsenicoxydans.;"
Putative 5'-nucleotidase n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G560_HERAR
A1-18-all-fractions_k255_3545237_11
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11242..12090)
DNA (849bp) protein (283aa)
S1/P1 Nuclease n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B72804
Uncharacterized protein {ECO:0000313|EMBL:EQB15242.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
S1/P1 nuclease
A1-18-all-fractions_k255_3545237_12
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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12156..12581
DNA (426bp) protein (142aa)
cdd; cytidine deaminase (EC:3.5.4.5)
cytidine deaminase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024886B4
Uncharacterized protein {ECO:0000313|EMBL:AHE54387.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
A1-18-all-fractions_k255_3545237_13
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12604..13551)
DNA (948bp) protein (316aa)
2OG-Fe(II) oxygenase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0Z5_9SPHN
Flavonol synthase {ECO:0000313|EMBL:KKC26346.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
2OG-Fe(II) oxygenase
A1-18-all-fractions_k255_3545237_14
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13578..14825)
DNA (1248bp) protein (416aa)
Nucleoside permease NupC n=1 Tax=Sphingomonas sp. S17 RepID=F3X279_9SPHN
nucleoside permease
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
A1-18-all-fractions_k255_3545237_15
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(14850..15428)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R021_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV61139.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
A1-18-all-fractions_k255_3545237_16
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15425..16141)
DNA (717bp) protein (239aa)
carbohydrate kinase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002489B6D
ribokinase family sugar kinase
Ribokinase family sugar kinase {ECO:0000313|EMBL:BAK68546.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 16 items

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