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A1-18-all-fractions_k255_4096371

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_4096371_1
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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100..1392
DNA (1293bp) protein (431aa)
potassium transporter Kup n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00037DE868
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
potassium transporter
A1-18-all-fractions_k255_4096371_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1423..1986
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000364AE26
Uncharacterized protein {ECO:0000313|EMBL:GAO38995.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
photosystem reaction center subunit H
A1-18-all-fractions_k255_4096371_3
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1971..2477
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. AP49 RepID=J2D757_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:AHE53430.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
A1-18-all-fractions_k255_4096371_4
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria

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comp(2474..2899)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI00024893DF
Uncharacterized protein {ECO:0000313|EMBL:KIY14298.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
hypothetical protein
A1-18-all-fractions_k255_4096371_5
unknown

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comp(3169..3657)
DNA (489bp) protein (163aa)

This feature has no annotations

A1-18-all-fractions_k255_4096371_6
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3654..4907)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003825BCB
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEM52054.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
A1-18-all-fractions_k255_4096371_7
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4910..6637)
DNA (1728bp) protein (576aa)
Outer membrane polysaccharide N-deacetylase n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A0T1_PELCD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF07372.1}; TaxID=483547 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
A1-18-all-fractions_k255_4096371_8
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6640..8868)
DNA (2229bp) protein (743aa)
hypothetical protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=UPI00036B4C0F
hypothetical protein
Tax=BJP_IG2157_Desulfuromonadales_56_134
A1-18-all-fractions_k255_4096371_9
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(9750..10271)
DNA (522bp) protein (174aa)
PREDICTED: collagen alpha-1(IV) chain-like n=1 Tax=Oryzias latipes RepID=UPI0002A4A855
Collagen triple helix repeat (20 copies) {ECO:0000313|EMBL:CRD23955.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium tuberculosis.;"
triple helix repeat-containing collagen
A1-18-all-fractions_k255_4096371_10
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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10304..10927
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IS36_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK66196.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
A1-18-all-fractions_k255_4096371_11
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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11004..11528
DNA (525bp) protein (175aa)
pathogenesis-like protein n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B40952
Pathogenesis-like protein {ECO:0000313|EMBL:KHS41748.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
pathogenesis-like protein
A1-18-all-fractions_k255_4096371_12
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11507..12679)
DNA (1173bp) protein (391aa)
cystathionine beta-lyase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CB0AB
cystathionine beta-lyase
Cystathionine beta-lyase {ECO:0000313|EMBL:ABQ70121.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_4096371_13
Deinococcus radiodurans, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(12749..13111)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Deinococcus wulumuqiensis RepID=UPI0003470504
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAF11894.1}; TaxID=243230 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 /; LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422).;"
A1-18-all-fractions_k255_4096371_14
unknown

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comp(13111..13344)
DNA (234bp) protein (78aa)

This feature has no annotations

A1-18-all-fractions_k255_4096371_15
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


13749..15071
DNA (1323bp) protein (441aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
Proline--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_01570}; EC=6.1.1.15 {ECO:0000255|HAMAP-Rule:MF_01570};; Prolyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_01570}; Short=ProRS {ECO:0000255|HAMAP-Rule:MF_01570};; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
prolyl-tRNA synthetase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003601271
A1-18-all-fractions_k255_4096371_16
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15068..16318
DNA (1251bp) protein (417aa)
Liporeleasing system, transmembrane , LolC/E family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WSF4_9SPHN
Lipoprotein-releasing system transmembrane protein LolC/E family protein {ECO:0000313|EMBL:GAO40880.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
lipoprotein releasing system transmembrane protein LolC/E family
A1-18-all-fractions_k255_4096371_17
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16311..16910
DNA (600bp) protein (200aa)
phosphonate-transporting ATPase (EC:3.6.3.28)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=690566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum L-1.;"
ABC transporter ATP-binding protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B64585
Displaying 17 items

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