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A1-18-all-fractions_k255_4350653

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_4350653_1
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..298
DNA (297bp) protein (99aa)
Chromosome partitioning protein ParA n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GZA4_9SPHN
Chromosome partitioning protein ParA {ECO:0000313|EMBL:KEQ52572.1}; TaxID=46429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
parA; chromosome partitioning protein ParA
A1-18-all-fractions_k255_4350653_2
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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295..1203
DNA (909bp) protein (303aa)
ParB-like partition protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S484_9SPHN
parB-like partition protein
ParB-like partition protein {ECO:0000313|EMBL:AGH49753.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_4350653_3
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1200..2219)
DNA (1020bp) protein (340aa)
DNA polymerase III subunit delta n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S1T7_9SPHN
DNA polymerase III subunit delta
DNA polymerase III subunit delta {ECO:0000313|EMBL:AGH49741.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_4350653_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2216..2710)
DNA (495bp) protein (165aa)
Secreted (Periplasmic)-like protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SGL7_9SPHN
secreted (periplasmic)-like protein
Secreted (Periplasmic)-like protein {ECO:0000313|EMBL:AGH49742.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_4350653_5
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2710..5229)
DNA (2520bp) protein (840aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
leuS; leucyl-tRNA ligase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S477_9SPHN
A1-18-all-fractions_k255_4350653_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5239..5673)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3C4_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:GAO54896.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
A1-18-all-fractions_k255_4350653_7
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5860..6588
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC5F3
Uncharacterized protein {ECO:0000313|EMBL:AHE56676.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
A1-18-all-fractions_k255_4350653_8
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6578..7015)
DNA (438bp) protein (146aa)
thiamine monophosphate synthase n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288CFBE
thiamine monophosphate synthase
Thiamine monophosphate synthase {ECO:0000313|EMBL:ABQ69208.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
A1-18-all-fractions_k255_4350653_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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7017..7703
DNA (687bp) protein (229aa)
Alanine racemase domain-containing protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4SGM2_9SPHN
alanine racemase domain-containing protein
Alanine racemase domain-containing protein {ECO:0000313|EMBL:AGH49747.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_4350653_10
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7706..8380
DNA (675bp) protein (225aa)
haloacid dehalogenase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002EAFB9D
Putative hydrolase {ECO:0000313|EMBL:GAO40106.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
haloacid dehalogenase
A1-18-all-fractions_k255_4350653_11
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8365..9423)
DNA (1059bp) protein (353aa)
GTP cyclohydrolase II {ECO:0000256|SAAS:SAAS00129532}; EC=3.5.4.25 {ECO:0000256|SAAS:SAAS00129532};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
GTP cyclohydrolase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248B8AF
GTP cyclohydrolase II
A1-18-all-fractions_k255_4350653_12
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9420..10319)
DNA (900bp) protein (300aa)
Exodeoxyribonuclease III n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0U7_9SPHN
exodeoxyribonuclease III
Exodeoxyribonuclease III {ECO:0000313|EMBL:AGH49625.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_4350653_13
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10436..11038)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036C76AA
outer membrane lipoprotein carrier protein LolA
Tax=GWF1_Sphingomonadales_63_6_curated
A1-18-all-fractions_k255_4350653_14
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11120..13444)
DNA (2325bp) protein (775aa)
DNA translocase FtsK n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCJ3_SPHWW
DNA translocase FtsK {ECO:0000313|EMBL:GAO40017.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
DNA translocase FtsK
A1-18-all-fractions_k255_4350653_15
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13543..14757
DNA (1215bp) protein (405aa)
ubiquinone biosynthesis protein UbiH n=2 Tax=Sphingomonas melonis RepID=UPI00035F8CBC
Sphingomonas taxi strain 30a NODE_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIU26401.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
A1-18-all-fractions_k255_4350653_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14758..15393)
DNA (636bp) protein (212aa)
ATP-dependent protease n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B34C1A
peptidase S16, lon-like protein
Peptidase S16, lon-like protein {ECO:0000313|EMBL:AGH49401.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_4350653_17
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15390..16298)
DNA (909bp) protein (303aa)
Thioredoxin domain-containing protein n=1 Tax=Sphingobium sp. AP49 RepID=J2W9A3_9SPHN
Thioredoxin {ECO:0000313|EMBL:AHE56787.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
ybbN; putative thioredoxin
A1-18-all-fractions_k255_4350653_18
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16618..17358
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Asticcacaulis sp. AC460 RepID=V4PQW2_9CAUL
Uncharacterized protein {ECO:0000313|EMBL:EXS69568.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
membrane protein
A1-18-all-fractions_k255_4350653_19
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(17351..17782)
DNA (432bp) protein (144aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W8S2_9CAUL
Cyclic pyranopterin monophosphate synthase accessory protein {ECO:0000256|HAMAP-Rule:MF_01224}; Molybdenum cofactor biosynthesis protein C {ECO:0000256|HAMAP-Rule:MF_01224}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
moaC2; molybdenum cofactor biosynthesis protein C
A1-18-all-fractions_k255_4350653_20
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17821..18360)
DNA (540bp) protein (180aa)
Molybdopterin biosynthesis protein B n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RFL5_PHEZH
molybdopterin biosynthesis protein B
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
A1-18-all-fractions_k255_4350653_21
R_Brevundimonas_68_13, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18364..18822)
DNA (459bp) protein (153aa)
Molybdopterin converting factor, subunit 2 n=1 Tax=Brevundimonas sp. BAL3 RepID=B4W8S0_9CAUL
molybdopterin biosynthesis MoaE protein
Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
A1-18-all-fractions_k255_4350653_22
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18819..19076)
DNA (258bp) protein (86aa)
ThiamineS protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UYB3_TERSS
sulfur carrier protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ADV82001.1}; TaxID=401053 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
A1-18-all-fractions_k255_4350653_23
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19199..19777
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036BA4D3
Uncharacterized protein {ECO:0000313|EMBL:EKS41134.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
Succinate dehydrogenase cytochrome b subunit family protein
A1-18-all-fractions_k255_4350653_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19774..21087
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI0003827386
Uncharacterized protein {ECO:0000313|EMBL:EKS41135.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
L-sorbosone dehydrogenase
A1-18-all-fractions_k255_4350653_25
Rhodomicrobium udaipurense, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21107..21916
DNA (810bp) protein (270aa)
Succinate-semialdehyde dehydrogenase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RAZ4_PHEZH
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KAI94134.1}; TaxID=858455 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium udaipurense JA643.;"
succinate-semialdehyde dehydrogenase
Displaying 25 items

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