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A1-18-all-fractions_k255_1069776

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1069776_1
unknown

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comp(1..189)
DNA (189bp) protein (63aa)

This feature has no annotations

A1-18-all-fractions_k255_1069776_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(768..1586)
DNA (819bp) protein (273aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=883163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae ATCC 51230.;"
NAD+ kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9DD27_SPHYA
A1-18-all-fractions_k255_1069776_3
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2153..2587
DNA (435bp) protein (145aa)
EAL domain protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WVK3_9SPHN
DNA, contig: SP612 {ECO:0000313|EMBL:GAN12626.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;"
putative diguanylate cyclase/phosphodiesterase
A1-18-all-fractions_k255_1069776_4
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2584..6072)
DNA (3489bp) protein (1163aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
transcription-repair coupling factor n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488662
transcription-repair coupling factor
A1-18-all-fractions_k255_1069776_5
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6069..6344)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000288589F
Uncharacterized protein {ECO:0000313|EMBL:GAO38837.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A1-18-all-fractions_k255_1069776_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6399..8459
DNA (2061bp) protein (687aa)
ATP-dependent DNA helicase RecG n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488664
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:GAO38836.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
DEAD/DEAH box helicase
A1-18-all-fractions_k255_1069776_7
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8471..8920
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WA55_9CAUL
Putative uncharacterized protein {ECO:0000313|EMBL:EDX79572.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
hypothetical protein
A1-18-all-fractions_k255_1069776_8
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8917..10140)
DNA (1224bp) protein (408aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
tyrosyl-tRNA synthetase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B329F7
A1-18-all-fractions_k255_1069776_9
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10187..10726
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCB7B
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
A1-18-all-fractions_k255_1069776_10
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10737..11936
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI000263069E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJP71833.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A1-18-all-fractions_k255_1069776_11
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12177..13574
DNA (1398bp) protein (466aa)
Methyl-accepting chemotaxis sensory transducer n=2 Tax=Sphingomonas wittichii RepID=A5VDF9_SPHWW
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:GAO38108.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
methyl-accepting chemotaxis sensory transducer
A1-18-all-fractions_k255_1069776_12
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13690..14361
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000369FDE1
Uncharacterized protein {ECO:0000313|EMBL:KKC23914.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
A1-18-all-fractions_k255_1069776_13
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14358..14645)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S8G6_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH50809.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
A1-18-all-fractions_k255_1069776_14
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14894..15310
DNA (417bp) protein (139aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446}; TaxID=680198 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabies (strain 87.22) (Streptomyces scabiei).;"
Aspartate 1-decarboxylase n=1 Tax=Streptomyces scabies (strain 87.22) RepID=C9Z548_STRSW
panD; L-aspartate-alpha-decarboxylase
A1-18-all-fractions_k255_1069776_15

Not on your lists

comp(15285..16490)
DNA (1206bp) protein (402aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC3C3
Uncharacterized protein {ECO:0000313|EMBL:AGU09936.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
A1-18-all-fractions_k255_1069776_16
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16547..17035
DNA (489bp) protein (163aa)
msrB2; peptide methionine sulfoxide reductase MsrB 2 (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB 2 {ECO:0000313|EMBL:ACP22240.1}; EC=1.8.4.11 {ECO:0000313|EMBL:ACP22240.1};; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
methionine sulfoxide reductase B n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI0003642CF7
A1-18-all-fractions_k255_1069776_17
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17036..17878
DNA (843bp) protein (281aa)
Peptidase S1B family protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VXF0_9SPHN
peptidase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
A1-18-all-fractions_k255_1069776_18
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17937..18176
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CCA34
Uncharacterized protein {ECO:0000313|EMBL:AHE56839.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
A1-18-all-fractions_k255_1069776_19
Vibrio sp. C7, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18115..18591
DNA (477bp) protein (159aa)
PAP2 superfamily protein n=1 Tax=Vibrio cholerae O1 str. EM-1676A RepID=M7L0R9_VIBCL
Membrane-associated phospholipid phosphatase {ECO:0000313|EMBL:GAL12102.1}; TaxID=1001886 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio sp. C7.;"
PAP2 family protein
A1-18-all-fractions_k255_1069776_20
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18579..19328)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Sphingomonas RepID=UPI0002882815
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
A1-18-all-fractions_k255_1069776_21
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19440..19973
DNA (534bp) protein (178aa)
Putative acetyltransferase {ECO:0000313|EMBL:BAK66301.1}; EC=2.3.1.- {ECO:0000313|EMBL:BAK66301.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Putative acetyltransferase n=1 Tax=Sphingobium sp. SYK-6 RepID=G2ISE1_9SPHN
putative acetyltransferase
A1-18-all-fractions_k255_1069776_22
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19980..20363
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CDADF
TonB-like protein
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:ABD24466.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
A1-18-all-fractions_k255_1069776_23
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20620..21087
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZN5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM29427.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
A1-18-all-fractions_k255_1069776_24
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21171..21893
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4YZN4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM29426.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
A1-18-all-fractions_k255_1069776_25
unknown

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21969..22214
DNA (246bp) protein (82aa)

This feature has no annotations

A1-18-all-fractions_k255_1069776_26
Brevundimonas diminuta, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22493..23038
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QDB4_BREDI
Uncharacterized protein {ECO:0000313|EMBL:EKY25587.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;"
hypothetical protein
Displaying 26 items

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