ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

A1-18-all-fractions_k255_18506_9

Organism: A1-18-all-fractions_metab_conc_42

partial RP 36 / 55 MC: 4 BSCG 37 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(12647..13288)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 210.0
  • Bit_score: 353
  • Evalue 1.40e-94
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0S3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 210.0
  • Bit_score: 353
  • Evalue 9.60e-95
rrmJ; 23S rRNA methyltransferase J similarity KEGG
DB: KEGG
  • Identity: 82.4
  • Coverage: 210.0
  • Bit_score: 353
  • Evalue 2.70e-95

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. MM-1 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
GTGAAGCGGCTGAAGACGGCAAAAGGCCGCAAGATCTCATCGACCCGCTGGCTCGAACGGCAACTCAACGATCCATATGTACAACGGGCCCGAGCTGATAATTACCGAAGCCGCGCTGCATACAAGCTGCTCGAGCTCGATGAGCGCTTCGCGCTGCTTAAGGGGGTACGCGCGGTCGTTGATCTTGGAATTGCGCCAGGCGGCTGGAGTCAGGTTGTCAGGCGCAAGACGCCGCAGGCGAGCATCGTCGGCATCGACCTGCTGCCCACCGATCCCATAGAAGGCGTGACCATATTGCAGATGGATTTTATGGACGAGGCGGCGCCGGAACGCCTGAAGGAGGCGCTTGGCGGGGATGCCGATCTCGTCCTCTCAGACATGGCCGCGAACACTGTGGGCCATCCGCAGACCGACCACTTAAGAACGATGGCACTGGTCGAGGCGGGTCTTGAGTTCGCATGCGAGATCTTGCGTCCCGGGGGCGCGTACGTTGCCAAGGTTCTCGCCGGCGGCGCCGACAATGACCTGGTCGCACAGCTCAAGCGGCGTTTTTCCAGCGTGAAACATGCGAAGCCGCCGGCAAGCCGCAAGGATTCCTCAGAATGGTACGTCGTCGCCCAGGGATTCAAGGCCGTGAGATAA
PROTEIN sequence
Length: 214
VKRLKTAKGRKISSTRWLERQLNDPYVQRARADNYRSRAAYKLLELDERFALLKGVRAVVDLGIAPGGWSQVVRRKTPQASIVGIDLLPTDPIEGVTILQMDFMDEAAPERLKEALGGDADLVLSDMAANTVGHPQTDHLRTMALVEAGLEFACEILRPGGAYVAKVLAGGADNDLVAQLKRRFSSVKHAKPPASRKDSSEWYVVAQGFKAVR*