ggKbase home page

A1-18-all-fractions_k255_18506

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_18506_1

Not on your lists

comp(1..477)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00037AB835
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1447247 species="Bacteria; environmental samples.;" source="uncultured bacterium lac82.;"
peptide chain release factor 2
A1-18-all-fractions_k255_18506_2

Not on your lists

comp(517..3147)
DNA (2631bp) protein (877aa)
1A family penicillin-binding protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0S0_9SPHN
Penicillin-binding protein {ECO:0000313|EMBL:AHN97772.1}; TaxID=1447247 species="Bacteria; environmental samples.;" source="uncultured bacterium lac82.;"
1A family penicillin-binding protein
A1-18-all-fractions_k255_18506_3

Not on your lists

comp(3190..4062)
DNA (873bp) protein (291aa)
Cell wall hydrolase n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HAS4_9SPHN
Amidase_3 {ECO:0000313|EMBL:AHN97771.1}; TaxID=1447247 species="Bacteria; environmental samples.;" source="uncultured bacterium lac82.;"
cell wall hydrolase/autolysin
A1-18-all-fractions_k255_18506_4

Not on your lists

4475..6931
DNA (2457bp) protein (819aa)
RNAse E (EC:3.1.4.-)
Ribonuclease E n=1 Tax=Sphingomonas sp. S17 RepID=F3WTS3_9SPHN
Rne/Rng family ribonuclease {ECO:0000313|EMBL:AHN97770.1}; Flags: Fragment;; TaxID=1447247 species="Bacteria; environmental samples.;" source="uncultured bacterium lac82.;"
A1-18-all-fractions_k255_18506_5
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6953..8392
DNA (1440bp) protein (480aa)
peptidase M48 n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A78B6F
Peptidase M48 {ECO:0000313|EMBL:EQB01773.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
peptidase M48 Ste24p
A1-18-all-fractions_k255_18506_6
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8389..9114
DNA (726bp) protein (242aa)
protein-disulfide isomerase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488F74
Putative oxidoreductase {ECO:0000313|EMBL:GAO39591.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
DSBA oxidoreductase
A1-18-all-fractions_k255_18506_7
Zymomonas mobilis, Zymomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9223..11349
DNA (2127bp) protein (709aa)
Prolyl oligopeptidase {ECO:0000313|EMBL:AAV89418.2}; EC=3.4.21.26 {ECO:0000313|EMBL:AAV89418.2};; Flags: Precursor;; TaxID=264203 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Zymomonas.;" source="Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4).;"
peptidase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028A288A
prolyl oligopeptidase
A1-18-all-fractions_k255_18506_8
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11354..12607)
DNA (1254bp) protein (418aa)
iron transporter n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289F099
natural resistance-associated macrophage protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A1-18-all-fractions_k255_18506_9
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12647..13288)
DNA (642bp) protein (214aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S0S3_9SPHN
rrmJ; 23S rRNA methyltransferase J
A1-18-all-fractions_k255_18506_10
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13285..14343)
DNA (1059bp) protein (353aa)
exopolyphosphatase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488F72
Exopolyphosphatase {ECO:0000313|EMBL:EJK84665.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
Ppx/GppA phosphatase
A1-18-all-fractions_k255_18506_11
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15041..18439
DNA (3399bp) protein (1133aa)
Trypsin n=1 Tax=Zymomonas mobilis subsp. mobilis str. CP4 = NRRL B-14023 RepID=V5Q5I1_ZYMMB
Outer membrane autotransporter barrel {ECO:0000313|EMBL:GAM99547.1}; TaxID=1605283 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
Trypsin
A1-18-all-fractions_k255_18506_12
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18680..20077)
DNA (1398bp) protein (466aa)
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J1U2_MYCSM
Glutathione reductase {ECO:0000313|EMBL:AKF04487.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component
A1-18-all-fractions_k255_18506_13
Malassezia sympodialis, Malassezia, Malasseziales, Malasseziomycetes, Basidiomycota, Fungi

Not on your lists

20319..20912
DNA (594bp) protein (198aa)
Genomic scaffold, msy_sf_14 n=1 Tax=Malassezia sympodialis (strain ATCC 42132) RepID=M5ECN5_MALS4
Genomic scaffold, msy_sf_14 {ECO:0000313|EMBL:CCV00094.1}; TaxID=1230383 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Ustilaginomycotina; Malasseziomycetes; Malasseziales; Malasseziaceae; Malassezia.;" source="Malassezia sympodialis (strain ATCC 42132) (Atopic eczema-associated; yeast).;"
A1-18-all-fractions_k255_18506_14
unknown

Not on your lists

21971..22123
DNA (153bp) protein (51aa)

This feature has no annotations

A1-18-all-fractions_k255_18506_15
unknown

Not on your lists

22123..22359
DNA (237bp) protein (79aa)

This feature has no annotations

A1-18-all-fractions_k255_18506_16
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22352..22468
DNA (117bp) protein (39aa)
UPI0003CFEC7D related cluster n=1 Tax=unknown RepID=UPI0003CFEC7D
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
A1-18-all-fractions_k255_18506_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(22721..23959)
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002FA36AC
Acetate kinase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
A1-18-all-fractions_k255_18506_18
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23959..24930)
DNA (972bp) protein (324aa)
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QX70_RALPI
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase {ECO:0000313|EMBL:AGW93836.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
A1-18-all-fractions_k255_18506_19
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24950..26386)
DNA (1437bp) protein (479aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LI94_SYNFM
RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABK17146.1}; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
A1-18-all-fractions_k255_18506_20
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26399..27526)
DNA (1128bp) protein (376aa)
ABC-2 type transporter n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RP23_ACCPU
ABC transporter
ABC-2 type transporter {ECO:0000313|EMBL:ACV35505.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
A1-18-all-fractions_k255_18506_21
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27529..28239)
DNA (711bp) protein (237aa)
ABC transporter related protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A801_STAND
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV35506.1}; TaxID=522306 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
Displaying 21 items

View Taxonomy