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A1-18-all-fractions_k255_1969169

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_1969169_1
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..154)
DNA (153bp) protein (51aa)
GTPase Der n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G9G7_9BRAD
engA; GTP-binding protein EngA
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
A1-18-all-fractions_k255_1969169_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213..761)
DNA (549bp) protein (183aa)
signal peptide protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00036E2780
Signal peptide protein {ECO:0000313|EMBL:KJC50984.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
A1-18-all-fractions_k255_1969169_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(772..1425)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F68CC4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE40233.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
A1-18-all-fractions_k255_1969169_4
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1542..2369)
DNA (828bp) protein (276aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J9DEE8_9RHOB
A1-18-all-fractions_k255_1969169_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2382..2975)
DNA (594bp) protein (198aa)
NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) n=1 Tax=Rhodovulum sp. PH10 RepID=J9DTB7_9RHOB
NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) {ECO:0000313|EMBL:EJW09667.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
A1-18-all-fractions_k255_1969169_6
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3236..4198
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PDC4_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39561.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
A1-18-all-fractions_k255_1969169_7
Burkholderia sp. AU4i, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4286..5809)
DNA (1524bp) protein (508aa)
Transcriptional regulator, GntR family domain (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2HLB0_BURVI
Aspartate aminotransferase {ECO:0000313|EMBL:ERJ41259.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;"
A1-18-all-fractions_k255_1969169_8
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6035..7069
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Pseudomonas fluorescens BBc6R8 RepID=V7EE06_PSEFL
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDG84366.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
A1-18-all-fractions_k255_1969169_9
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7381..7539
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DD7A99
Uncharacterized protein {ECO:0000313|EMBL:ERF80961.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
A1-18-all-fractions_k255_1969169_10
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7548..8099
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GTQ2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF80962.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
disulfide bond formation protein DsbB
A1-18-all-fractions_k255_1969169_11
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8190..9782)
DNA (1593bp) protein (531aa)
Putative Multidrug resistance protein, emrB-like n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGH5_9BRAD
Putative Multidrug resistance protein, emrB-like {ECO:0000313|EMBL:CCE05563.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
multidrug resistance protein EmrB-like protein
A1-18-all-fractions_k255_1969169_12
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9779..10933)
DNA (1155bp) protein (385aa)
Putative Multidrug resistance protein (HlyD family), emrA-like n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGH6_9BRAD
Putative Multidrug resistance protein (HlyD family), emrA-like {ECO:0000313|EMBL:CCE05564.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
HlyD family multidrug resistance protein
A1-18-all-fractions_k255_1969169_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11264..11962
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036C78E4
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46705.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
bacterial regulatory s, tetR family protein
A1-18-all-fractions_k255_1969169_14
Owenweeksia hongkongensis, Owenweeksia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

12258..12818
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R7R7_OWEHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV33448.1}; TaxID=926562 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Owenweeksia.;" source="Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL; B-23963).;"
A1-18-all-fractions_k255_1969169_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12667..13320)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI000362A70C
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:KCZ73051.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative NAD-dependent alcohol dehydrogenase
A1-18-all-fractions_k255_1969169_16
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(13487..13936)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3I6_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ38803.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
A1-18-all-fractions_k255_1969169_17
Erwinia billingiae, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14302..14799)
DNA (498bp) protein (166aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; O-6-methylguanine-DNA-alkyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; TaxID=634500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia billingiae (strain Eb661).;"
hypothetical protein n=1 Tax=Erwinia toletana RepID=UPI000347FF7C
ogt1; methylated-DNA--protein-cysteine methyltransferase
A1-18-all-fractions_k255_1969169_18
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14919..15605)
DNA (687bp) protein (229aa)
Transcriptional regulator ArsR family n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JT49_AGRVS
transcriptional regulator ArsR family
Transcriptional regulator ArsR family {ECO:0000313|EMBL:ACM35762.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
A1-18-all-fractions_k255_1969169_19
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15797..16495)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF080 RepID=J2J4F5_9RHIZ
Thioredoxin {ECO:0000313|EMBL:KIO50005.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
CalU12 protein
A1-18-all-fractions_k255_1969169_20
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

16619..17839
DNA (1221bp) protein (407aa)
hypothetical protein n=2 Tax=Burkholderia oklahomensis RepID=UPI00016A93F5
Malic enzyme
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
A1-18-all-fractions_k255_1969169_21
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17849..18535
DNA (687bp) protein (229aa)
UPI0003CE1A44 related cluster n=1 Tax=unknown RepID=UPI0003CE1A44
WD40-like repeat protein
Cupriavidus basilensis strain 4G11 chromosome main, complete sequence {ECO:0000313|EMBL:AJG20757.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
A1-18-all-fractions_k255_1969169_22
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18603..20204)
DNA (1602bp) protein (534aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TKL3_9BRAD
A1-18-all-fractions_k255_1969169_23
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20357..22483)
DNA (2127bp) protein (709aa)
MltA n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21CL1_RHOPB
MltA
MltA {ECO:0000313|EMBL:ABD85875.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
A1-18-all-fractions_k255_1969169_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22659..23102)
DNA (444bp) protein (148aa)
signal peptide protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036B46F1
Uncharacterized protein {ECO:0000313|EMBL:EKS40989.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
signal peptide protein
A1-18-all-fractions_k255_1969169_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23369..23947
DNA (579bp) protein (193aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J2N7_RHOP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD05273.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
A1-18-all-fractions_k255_1969169_26
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23963..25267)
DNA (1305bp) protein (435aa)
Sun protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PKJ8_9RHOB
Sun protein {ECO:0000313|EMBL:EJW11312.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Fmu (Sun) domain-containing protein
A1-18-all-fractions_k255_1969169_27
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25267..25689)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Microvirga sp. WSM3557 RepID=I4Z023_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM29565.1}; Flags: Precursor;; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
A1-18-all-fractions_k255_1969169_28
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25810..27303)
DNA (1494bp) protein (498aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
guaB; inosine 5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SMR0_9BRAD
A1-18-all-fractions_k255_1969169_29
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27527..27775)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J5PGA9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW10492.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
A1-18-all-fractions_k255_1969169_30
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27887..29317
DNA (1431bp) protein (477aa)
Major facilitator superfamily MFS_1 n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VQA3_RHOPX
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADU44893.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
Displaying items 1-30 of 37 in total

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