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A3-16-all-fractions_k255_1790283

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_1790283_1
Pseudomonas sp. GM60, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..720)
DNA (720bp) protein (240aa)
Arabinose efflux permease family protein n=1 Tax=Pseudomonas sp. GM60 RepID=J3H9B6_9PSED
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJM88412.1}; Flags: Precursor;; TaxID=1144334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM60.;"
MFS transporter
A3-16-all-fractions_k255_1790283_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(766..1719)
DNA (954bp) protein (318aa)
Alpha/beta hydrolase fold n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07I22_RHOP5
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABJ08412.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
A3-16-all-fractions_k255_1790283_3
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1899..2498)
DNA (600bp) protein (200aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
NAD(P)H dehydrogenase (quinone) n=1 Tax=Thauera sp. 63 RepID=N6XGJ1_9RHOO
wrbA1; trp repressor binding protein
A3-16-all-fractions_k255_1790283_4
Caulobacter vibrioides, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2581..3291)
DNA (711bp) protein (237aa)
membrane protein n=1 Tax=Nevskia ramosa RepID=UPI0003B30F9D
Putative membrane protein {ECO:0000313|EMBL:ENZ79546.1}; Flags: Precursor;; TaxID=1292034 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter crescentus OR37.;"
permease
A3-16-all-fractions_k255_1790283_5
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3288..3713)
DNA (426bp) protein (142aa)
Putative membrane protein n=1 Tax=Caulobacter sp. AP07 RepID=J2HCJ7_9CAUL
DoxX family protein
DoxX family protein {ECO:0000313|EMBL:AJP71801.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
A3-16-all-fractions_k255_1790283_6
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3724..5583)
DNA (1860bp) protein (620aa)
Amidohydrolase 3 n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VJN8_CAUST
amidohydrolase
Amidohydrolase 3 {ECO:0000313|EMBL:ADG10567.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
A3-16-all-fractions_k255_1790283_7
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5573..5821)
DNA (249bp) protein (83aa)
XapX domain-containing protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QRC1_9BURK
XapX domain-containing protein {ECO:0000313|EMBL:ETF02187.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
ABC transporter substrate-binding protein
A3-16-all-fractions_k255_1790283_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6071..6562
DNA (492bp) protein (164aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TJP7_RICCO
Variovorax paradoxus strain MEDvA23 contig_61, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26145.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
A3-16-all-fractions_k255_1790283_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6589..7869
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAH8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63013.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
A3-16-all-fractions_k255_1790283_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7866..8627
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAH9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63014.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
A3-16-all-fractions_k255_1790283_11
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8654..9253)
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003800C0E
LuxR family transcriptional regulator {ECO:0000313|EMBL:KFI08709.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
transcriptional regulator, LuxR family
A3-16-all-fractions_k255_1790283_12
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9293..9946)
DNA (654bp) protein (218aa)
Isochorismatase hydrolase n=2 Tax=Sinorhizobium medicae RepID=A6UGK3_SINMW
NTE family protein {ECO:0000313|EMBL:KFC71593.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative hydrolase
A3-16-all-fractions_k255_1790283_13
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9976..10740)
DNA (765bp) protein (255aa)
short-chain dehydrogenase n=1 Tax=Burkholderia kururiensis RepID=UPI00037A371B
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADX54640.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
A3-16-all-fractions_k255_1790283_14
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11058..13889
DNA (2832bp) protein (944aa)
Putative adenylate cyclase/transcriptional regulator n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y4N5_9PROT
Putative adenylate cyclase/transcriptional regulator {ECO:0000313|EMBL:EGX99521.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
transcriptional regulatory , C terminal family protein
A3-16-all-fractions_k255_1790283_15
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14004..15203
DNA (1200bp) protein (400aa)
hypothetical protein n=1 Tax=Sphingomonas wittichii RepID=UPI00037404D2
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADG10501.1}; Flags: Precursor;; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
Displaying 15 items

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