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A3-16-all-fractions_k255_1843966

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_1843966_1
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(272..454)
DNA (183bp) protein (61aa)
50S ribosomal protein L32 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RL32_LEPCP
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
rpmF; 50S ribosomal protein L32
A3-16-all-fractions_k255_1843966_2
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(773..1954)
DNA (1182bp) protein (394aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthetase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F13E38
A3-16-all-fractions_k255_1843966_3
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2145..2768)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI000347A0F2
Uncharacterized protein {ECO:0000313|EMBL:EWS61138.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein
A3-16-all-fractions_k255_1843966_4
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2812..3435
DNA (624bp) protein (208aa)
septum formation protein Maf n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B54D45
Maf-like protein X805_21830 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
hypothetical protein
A3-16-all-fractions_k255_1843966_5
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3432..4223
DNA (792bp) protein (264aa)
Putative transmembrane protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNN1_9BURK
Putative transmembrane protein {ECO:0000313|EMBL:EGJ09949.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
tetrapyrrole methylase family protein
A3-16-all-fractions_k255_1843966_6
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4233..6383)
DNA (2151bp) protein (717aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI00036CDA72
hypothetical protein
Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
A3-16-all-fractions_k255_1843966_7
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6522..7436
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002EBF650
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
A3-16-all-fractions_k255_1843966_8
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7495..8988)
DNA (1494bp) protein (498aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.4.13)
DNA/RNA helicase, superfamily II n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSB9_9BURK
DNA/RNA helicase, superfamily II {ECO:0000313|EMBL:EHR72916.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-16-all-fractions_k255_1843966_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9193..11229
DNA (2037bp) protein (679aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI000347CAE2
kpsD; capsule polysaccharide export system periplasmic protein KpsD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_1843966_10
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11229..12431
DNA (1203bp) protein (401aa)
Capsule polysaccharide export protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WSI7_9BURK
lipopolysaccharide biosynthesis protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_1843966_11
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12514..12900
DNA (387bp) protein (129aa)
EPS-associated transcriptional regulator, MarR family {ECO:0000313|EMBL:EWS56180.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Hypothetical cytosolic protein id=4940661 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
transcriptional regulator
A3-16-all-fractions_k255_1843966_12
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13070..14080
DNA (1011bp) protein (337aa)
dTDP-glucose 4,6-dehydratase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUF2_9BRAD
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:EAQ36387.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
NAD-dependent epimerase/dehydratase
A3-16-all-fractions_k255_1843966_13
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14088..15284
DNA (1197bp) protein (399aa)
Putative aminotransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUF3_9BRAD
Putative aminotransferase {ECO:0000313|EMBL:EAQ36388.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
DegT/DnrJ/EryC1/StrS aminotransferase
A3-16-all-fractions_k255_1843966_14
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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15288..16457
DNA (1170bp) protein (390aa)
neuC; N-acetylglucosamine-6-phosphate 2-epimerase/N-acetylglucosamine-6-phosphatase (EC:5.1.3.14)
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing id=4892972 bin=GWC2_Methylomirabilis_70_16 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Elusimicrobia_69_24_curated
A3-16-all-fractions_k255_1843966_15
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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16441..17517
DNA (1077bp) protein (359aa)
Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) RepID=Q7NQV5_CHRVO
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAQ61692.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /; NBRC 12614 / NCIMB 9131 / NCTC 9757).;"
A3-16-all-fractions_k255_1843966_16
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17514..18599
DNA (1086bp) protein (362aa)
neuB; N-acetylneuraminic acid synthase (EC:2.5.1.56)
N-acetylneuraminate synthase n=1 Tax=Herbaspirillum sp. CF444 RepID=J2KMS2_9BURK
N-acetylneuraminate synthase {ECO:0000313|EMBL:EJL81415.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
A3-16-all-fractions_k255_1843966_17
Chromobacterium violaceum, Chromobacterium, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18604..19596
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00037ACF60
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AAQ64068.1}; TaxID=243365 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Chromobacterium.;" source="Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 /; NBRC 12614 / NCIMB 9131 / NCTC 9757).;"
A3-16-all-fractions_k255_1843966_18
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19599..20285
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Brevibacillus brevis RepID=UPI00036B3D6D
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ABX50280.1}; TaxID=399599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella baltica (strain OS195).;"
A3-16-all-fractions_k255_1843966_19
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20282..21331
DNA (1050bp) protein (350aa)
Nucleoside-diphosphate-sugar pyrophosphorylase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUE7_9BRAD
Nucleoside-diphosphate-sugar pyrophosphorylase {ECO:0000313|EMBL:EAQ36392.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
nucleotidyltransferase
A3-16-all-fractions_k255_1843966_20
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21328..22041
DNA (714bp) protein (238aa)
N-acylneuraminate cytidylyltransferase (EC:2.7.7.43)
CMP-N-acetlyneuraminic acid synthetase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WUE9_9BRAD
CMP-N-acetlyneuraminic acid synthetase {ECO:0000313|EMBL:EAQ36393.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
A3-16-all-fractions_k255_1843966_21
Paraglaciecola mesophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22060..23178
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6YM15_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:GAC25046.1}; TaxID=1128912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola mesophila KMM 241.;"
A3-16-all-fractions_k255_1843966_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23231..23839
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Bacteroides fragilis RepID=I3HNA7_BACFG
Uncharacterized protein {ECO:0000313|EMBL:EIY93164.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
lacA; acetyltransferase
A3-16-all-fractions_k255_1843966_23
Paraglaciecola mesophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23823..24362
DNA (540bp) protein (180aa)
Acetyltransferase n=1 Tax=Glaciecola mesophila KMM 241 RepID=K6ZNW4_9ALTE
Acetyltransferase {ECO:0000313|EMBL:GAC25045.1}; TaxID=1128912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola mesophila KMM 241.;"
lacA; acetyltransferase
A3-16-all-fractions_k255_1843966_24
unknown

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24528..25769
DNA (1242bp) protein (414aa)

This feature has no annotations

A3-16-all-fractions_k255_1843966_25
unknown

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25784..26572
DNA (789bp) protein (263aa)

This feature has no annotations

A3-16-all-fractions_k255_1843966_26
unknown

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26569..27822
DNA (1254bp) protein (418aa)

This feature has no annotations

A3-16-all-fractions_k255_1843966_27
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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27819..28940
DNA (1122bp) protein (374aa)
Probable: Putative GlcNAc transferase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P6V6_AROAE
GlcNAc transferase
Probable: Putative GlcNAc transferase {ECO:0000313|EMBL:CAI06955.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
A3-16-all-fractions_k255_1843966_28
Pseudoalteromonas citrea, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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28928..29647
DNA (720bp) protein (240aa)
N-acetylmannosaminyltransferase (EC:2.4.1.187)
WecB/TagA/CpsF family glycosyl transferase n=1 Tax=Pseudoalteromonas citrea NCIMB 1889 RepID=U1J7R6_9GAMM
WecB/TagA/CpsF family glycosyl transferase {ECO:0000313|EMBL:ERG17416.1}; TaxID=1117314 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas citrea NCIMB 1889.;"
A3-16-all-fractions_k255_1843966_29
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(29692..31617)
DNA (1926bp) protein (642aa)
Polysaccharide biosynthesis protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNS1_9BURK
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EGJ09989.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
capD; polysaccharide biosynthesis protein CapD
Displaying 29 items

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