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A3-16-all-fractions_k255_7303325

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_7303325_1
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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3..1184
DNA (1182bp) protein (394aa)
Alpha-N-arabinofuranosidase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HZ11_9ACTO
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:ETK32878.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
alpha-N-arabinofuranosidase
A3-16-all-fractions_k255_7303325_2
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1286..1687
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035F0321
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK61985.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
A3-16-all-fractions_k255_7303325_3
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1858..2619
DNA (762bp) protein (254aa)
elongation factor GreAB n=1 Tax=Acidovorax radicis RepID=UPI0002375BDD
transcription elongation factor grea/greb domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_7303325_4
unknown

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3242..3955
DNA (714bp) protein (238aa)

This feature has no annotations

A3-16-all-fractions_k255_7303325_5
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3993..4640)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Pseudoalteromonas undina NCIMB 2128 RepID=U1LGJ8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KFC63342.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
A3-16-all-fractions_k255_7303325_6
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4642..5082)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2LCG0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKE87560.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
hypothetical protein
A3-16-all-fractions_k255_7303325_7
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5325..6059
DNA (735bp) protein (245aa)
Acyl-homoserine-lactone synthase {ECO:0000256|RuleBase:RU361135}; EC=2.3.1.184 {ECO:0000256|RuleBase:RU361135};; Autoinducer synthesis protein {ECO:0000256|RuleBase:RU361135}; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
Autoinducer synthesis protein n=3 Tax=Acidithiobacillus ferrooxidans RepID=B5EJV7_ACIF5
autoinducer synthesis protein
A3-16-all-fractions_k255_7303325_8
unknown

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6209..6559
DNA (351bp) protein (117aa)

This feature has no annotations

A3-16-all-fractions_k255_7303325_9
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6577..7290)
DNA (714bp) protein (238aa)
Transcriptional regulator, LuxR family n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IU59_9GAMM
transcriptional regulator RhlR
Transcriptional regulator RhlR {ECO:0000313|EMBL:AIY41826.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
A3-16-all-fractions_k255_7303325_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7474..8178)
DNA (705bp) protein (235aa)
ABC transporter n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000382A60D
Methionine ABC transporter ATP-binding protein {ECO:0000313|EMBL:EJW12877.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
ABC transporter related
A3-16-all-fractions_k255_7303325_11
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8200..9315)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI000379536C
Multidrug resistance protein MdtA {ECO:0000313|EMBL:GAK33466.1}; TaxID=1492281 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
secretion protein HlyD family protein
A3-16-all-fractions_k255_7303325_12
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9315..10502)
DNA (1188bp) protein (396aa)
ABC transporter, permease protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWH3_RHOCS
ABC transporter permease
ABC transporter, permease protein, putative {ECO:0000313|EMBL:ACJ00647.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
A3-16-all-fractions_k255_7303325_13
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10525..11688)
DNA (1164bp) protein (388aa)
Putative ABC transport system permease n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2JVX5_9GAMM
Putative ABC transport system permease {ECO:0000313|EMBL:EKE87556.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
ABC transporter permease
A3-16-all-fractions_k255_7303325_14
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11713..12741)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2LCF6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKE87555.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
putative lantibiotic dehydrogenase domain
A3-16-all-fractions_k255_7303325_15
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12752..14242)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2KYA8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKE87554.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
A3-16-all-fractions_k255_7303325_16
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14239..16194)
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2KLX2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKE87552.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
hypothetical protein
A3-16-all-fractions_k255_7303325_17
unknown

Not on your lists

comp(16191..18059)
DNA (1869bp) protein (623aa)

This feature has no annotations

A3-16-all-fractions_k255_7303325_18
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18056..21913)
DNA (3858bp) protein (1286aa)
Lantibiotic dehydratase domain-containing protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2KYA5_9GAMM
Lantibiotic dehydratase domain-containing protein {ECO:0000313|EMBL:EKE87549.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
putative Lantibiotic dehydratase domain-containing protein
A3-16-all-fractions_k255_7303325_19
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21951..22706)
DNA (756bp) protein (252aa)
Putative integral membrane protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2KHX3_9GAMM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
integral membrane protein
A3-16-all-fractions_k255_7303325_20
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22703..23473)
DNA (771bp) protein (257aa)
ABC transporter n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2KLW4_9GAMM
ABC transporter {ECO:0000313|EMBL:EKE87547.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
Hypothetical protein
A3-16-all-fractions_k255_7303325_21
Idiomarina xiamenensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23569..23772)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Idiomarina xiamenensis 10-D-4 RepID=K2JVW4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EKE87546.1}; TaxID=740709 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina xiamenensis 10-D-4.;"
hypothetical protein
A3-16-all-fractions_k255_7303325_22
unknown

Not on your lists

comp(24328..24897)
DNA (570bp) protein (190aa)

This feature has no annotations

A3-16-all-fractions_k255_7303325_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25150..25869)
DNA (720bp) protein (240aa)
TetR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003714C4F
transcriptional regulator, TetR family
Transcriptional regulator, TetR family {ECO:0000313|EMBL:AGU48937.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
A3-16-all-fractions_k255_7303325_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25987..27045
DNA (1059bp) protein (353aa)
Secretion protein HlyD family protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CU41_VARPS
secretion protein HlyD family protein
Secretion protein HlyD family protein {ECO:0000313|EMBL:ACS18391.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A3-16-all-fractions_k255_7303325_25
Desulfovibrio sp. A2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27073..30099
DNA (3027bp) protein (1009aa)
YbhF domain protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2H9D5_9DELT
YbhF domain protein {ECO:0000313|EMBL:EGY25336.1}; TaxID=298701 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. A2.;"
ABC transporter
A3-16-all-fractions_k255_7303325_26
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30120..31241
DNA (1122bp) protein (374aa)
Putative ABC-2 type transporter, permease protein n=1 Tax=Variovorax paradoxus B4 RepID=T1X8Q7_VARPD
putative ABC-2 type transporter, permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
A3-16-all-fractions_k255_7303325_27
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31262..32797
DNA (1536bp) protein (512aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Variovorax sp. CF313 RepID=J2ST20_9BURK
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EJL68727.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
NodT family RND efflux system outer membrane lipoprotein
Displaying 27 items

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