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A3-16-all-fractions_k255_381672

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_381672_1
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

3..860
DNA (858bp) protein (286aa)
DNA polymerase III, tau subunit id=3383550 bin=GWA1_Deltaproteobacteria_52_35 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
Fe-S oxidoreductase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_381672_2
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

864..1514
DNA (651bp) protein (217aa)
Recombination protein RecR id=3383552 bin=GWA1_Deltaproteobacteria_52_35 species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
recombination protein RecR
Tax=GWA1_Bdellovibrionales_52_35_curated
A3-16-all-fractions_k255_381672_3
RIFOXYD1_FULL_Bdellovibrionales_44_7_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

1511..2092
DNA (582bp) protein (194aa)
GTPase-like protein id=3383555 bin=GWA1_Deltaproteobacteria_52_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
GTPase-like protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_44_7_curated
A3-16-all-fractions_k255_381672_4
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

2177..2587
DNA (411bp) protein (137aa)
Transcriptional regulator, TraR/DksA family id=3853074 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
TraR/DksA family transcriptional regulator
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_381672_5
unknown

Not on your lists

2645..3094
DNA (450bp) protein (150aa)

This feature has no annotations

A3-16-all-fractions_k255_381672_6
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

3277..3681
DNA (405bp) protein (135aa)
Transcriptional regulator, TraR/DksA family id=3853073 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
TraR/DksA family transcriptional regulator
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_381672_7
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(4077..5516)
DNA (1440bp) protein (480aa)
Peptidase S8 and S53, subtilisin, kexin, sedolisin id=3383565 bin=GWA1_Deltaproteobacteria_52_35 species=Trichodesmium erythraeum genus=Trichodesmium taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
protease
Tax=GWA1_Bdellovibrionales_52_35_curated
A3-16-all-fractions_k255_381672_8
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(5917..7464)
DNA (1548bp) protein (516aa)
Cell division protein FtsZ id=3853071 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
ftsZ; cell division protein
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_381672_9
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(7573..8841)
DNA (1269bp) protein (423aa)
Cell division protein ftsA id=3853070 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
cell division protein FtsA
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_381672_10
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(8901..9680)
DNA (780bp) protein (260aa)
Cell division protein id=3383577 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
cell division protein FtsQ
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_381672_11
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

9759..11153
DNA (1395bp) protein (465aa)
Processing peptidase id=3853068 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
protease
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_381672_12
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

11165..12544
DNA (1380bp) protein (460aa)
Putative uncharacterized protein id=3853067 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_381672_13
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(12548..13489)
DNA (942bp) protein (314aa)
UDP-N-acetylmuramate dehydrogenase id=3068026 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Heliobacterium modesticaldum genus=Heliobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
murB; UDP-N-acetylenolpyruvoylglucosamine reductase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_381672_14
Shewanella frigidimarina, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13486..14532)
DNA (1047bp) protein (349aa)
NADH:flavin oxidoreductase/NADH oxidase n=1 Tax=Shewanella frigidimarina (strain NCIMB 400) RepID=Q085A8_SHEFN
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase/NADH oxidase {ECO:0000313|EMBL:ABI71157.1}; TaxID=318167 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella frigidimarina (strain NCIMB 400).;"
A3-16-all-fractions_k255_381672_15
R_Deltaproteobacteria_40_11, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14586..15197
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Microbulbifer variabilis RepID=UPI00036976C8
LysR family transcriptional regulator
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_40_11_curated
A3-16-all-fractions_k255_381672_16
unknown

Not on your lists

15576..15863
DNA (288bp) protein (96aa)

This feature has no annotations

A3-16-all-fractions_k255_381672_17
unknown

Not on your lists

15860..16855
DNA (996bp) protein (332aa)

This feature has no annotations

A3-16-all-fractions_k255_381672_18
unknown

Not on your lists

comp(16852..17232)
DNA (381bp) protein (127aa)

This feature has no annotations

A3-16-all-fractions_k255_381672_19
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(17232..18635)
DNA (1404bp) protein (468aa)
UDP-N-acetylmuramate--L-alanine ligase id=3536745 bin=GWA1_Deltaproteobacteria_52_35 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
murC; UDP-N-acetylmuramate--L-alanine ligase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
A3-16-all-fractions_k255_381672_20
GWB1_Bdellovibrionales_55_8_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(18682..19785)
DNA (1104bp) protein (368aa)
murG; UDP-n-acetylglucosamine--n-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=3068024 bin=GWB1_Deltaproteobacteria_rel_55_8 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good
Tax=GWB1_Bdellovibrionales_55_8_curated
A3-16-all-fractions_k255_381672_21
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(19782..20987)
DNA (1206bp) protein (402aa)
Lipid II flippase FtsW id=3536747 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
cell division protein FtsW
Tax=GWA1_Bdellovibrionales_52_35_curated
A3-16-all-fractions_k255_381672_22
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(21011..22396)
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase id=3536748 bin=GWA1_Deltaproteobacteria_52_35 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
hypothetical protein
Tax=GWA1_Bdellovibrionales_52_35_curated
A3-16-all-fractions_k255_381672_23
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

comp(22417..23493)
DNA (1077bp) protein (359aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase id=3536749 bin=GWA1_Deltaproteobacteria_52_35 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase
Tax=GWA1_Bdellovibrionales_52_35_curated
A3-16-all-fractions_k255_381672_24
unknown

Not on your lists

23615..24160
DNA (546bp) protein (182aa)

This feature has no annotations

Displaying 24 items

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