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A3-18-all-fractions_k255_1463177

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_1463177_1
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..539
DNA (537bp) protein (179aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5Z5_LEPCP
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:ACB32342.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_1463177_2
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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545..1012
DNA (468bp) protein (156aa)
Cytochrome c n=1 Tax=Polaromonas sp. CF318 RepID=J2UHC5_9BURK
Cytochrome C {ECO:0000313|EMBL:KFG70913.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
putative cytochrome c SoxX protein
A3-18-all-fractions_k255_1463177_3
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1028..1489
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J3DFC0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL90806.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
sulfur oxidation protein SoxY
A3-18-all-fractions_k255_1463177_4
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1501..1821
DNA (321bp) protein (107aa)
Sulfur oxidation protein SoxZ n=1 Tax=Polaromonas sp. CF318 RepID=J2LF23_9BURK
Sulfur oxidation protein SoxZ {ECO:0000313|EMBL:EJL90805.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
sulfur oxidation protein SoxZ
A3-18-all-fractions_k255_1463177_5
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1818..2579
DNA (762bp) protein (254aa)
SoxAX cytochrome complex subunit A {ECO:0000256|PIRNR:PIRNR038455}; EC=1.8.2.- {ECO:0000256|PIRNR:PIRNR038455};; Protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; Sulfur oxidizing protein A {ECO:0000256|PIRNR:PIRNR038455}; Thiosulfate-oxidizing multienzyme system protein SoxA {ECO:0000256|PIRNR:PIRNR038455}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
UPI0003D06A00 related cluster n=1 Tax=unknown RepID=UPI0003D06A00
diheme cytochrome C; sulfur oxidizing protein SoxA
A3-18-all-fractions_k255_1463177_6
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2649..3209
DNA (561bp) protein (187aa)
Protocatechuate 3,4-dioxygenase beta subunit n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SQI1_HAHCH
protocatechuate 3,4-dioxygenase subunit beta
Protocatechuate 3,4-dioxygenase beta subunit {ECO:0000313|EMBL:ABC27093.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahella chejuensis (strain KCTC 2396).;"
A3-18-all-fractions_k255_1463177_7
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3238..4512
DNA (1275bp) protein (425aa)
FAD dependent oxidoreductase n=2 Tax=Burkholderia RepID=I5CI07_9BURK
FAD dependent oxidoreductase family protein {ECO:0000313|EMBL:KGR94101.1}; TaxID=1434929 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei ABCPW 111.;"
FAD dependent oxidoreductase
A3-18-all-fractions_k255_1463177_8
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4470..5612)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q221A5_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD68398.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-18-all-fractions_k255_1463177_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5747..6598
DNA (852bp) protein (284aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
dapF; diaminopimelate epimerase DapF (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WVJ7_9BURK
A3-18-all-fractions_k255_1463177_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6595..7266
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003744F61
Uncharacterized protein {ECO:0000313|EMBL:EGJ12189.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A3-18-all-fractions_k255_1463177_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7263..8207
DNA (945bp) protein (315aa)
Tyrosine recombinase XerC n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LV20_9BURK
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
tyrosine recombinase XerC subunit
A3-18-all-fractions_k255_1463177_12
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8218..9399
DNA (1182bp) protein (394aa)
23S rRNA methyltransferase n=1 Tax=Caldimonas manganoxidans RepID=UPI000369157C
putative SAM-dependent methyltransferase
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:BAL93860.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_1463177_13
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9446..9880
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003758AAF
Uncharacterized protein {ECO:0000313|EMBL:EZP38938.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
hypothetical protein
A3-18-all-fractions_k255_1463177_14
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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comp(9948..12536)
DNA (2589bp) protein (863aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNY9_9BURK
putative S8A family peptidase
Tax=RBG_16_Armatimonadetes_67_12_curated
A3-18-all-fractions_k255_1463177_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12698..13192)
DNA (495bp) protein (165aa)
Transcriptional regulator, AsnC family n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HLH5_RUBGI
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:BAL93862.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_1463177_16
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13331..15199
DNA (1869bp) protein (623aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
glucosamine--fructose-6-phosphate aminotransferase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036A9129
A3-18-all-fractions_k255_1463177_17
unknown

Not on your lists

comp(15218..15646)
DNA (429bp) protein (143aa)

This feature has no annotations

A3-18-all-fractions_k255_1463177_18
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15695..16735)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036C4998
AraC family transcriptional regulator {ECO:0000313|EMBL:EPX99564.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
AraC family transcriptional regulator
A3-18-all-fractions_k255_1463177_19
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16744..17577
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S102_9BURK
hypothetical protein
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22736.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
A3-18-all-fractions_k255_1463177_20
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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17677..18684
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TDU9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE04637.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
conserved exported hypothetical protein
A3-18-all-fractions_k255_1463177_21
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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18695..19252
DNA (558bp) protein (186aa)
C4-dicarboxylate ABC transporter permease n=1 Tax=Bradyrhizobium elkanii RepID=UPI000300A86A
Bradyrhizobium elkanii strain UASWS1015 Contig153, whole genome shotgun sequence {ECO:0000313|EMBL:KIU52930.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
C4-dicarboxylate ABC transporter permease
A3-18-all-fractions_k255_1463177_22
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19249..20589
DNA (1341bp) protein (447aa)
C4-dicarboxylate ABC transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003644F8B
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KJC45914.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
C4-dicarboxylate ABC transporter
A3-18-all-fractions_k255_1463177_23
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20600..21109)
DNA (510bp) protein (170aa)
Transcriptional regulatory protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JM62_AGRRK
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EJK88072.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
A3-18-all-fractions_k255_1463177_24
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21122..22639)
DNA (1518bp) protein (506aa)
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:CBS90652.1}; EC=1.1.1.- {ECO:0000313|EMBL:CBS90652.1};; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZH08_AZOL4
paaH; 3-hydroxybutyryl-CoA dehydrogenase
A3-18-all-fractions_k255_1463177_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22644..23873)
DNA (1230bp) protein (410aa)
Acyl-CoA dehydrogenase n=1 Tax=Variovorax paradoxus B4 RepID=T1XMZ1_VARPD
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AGU53634.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
A3-18-all-fractions_k255_1463177_26
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24008..24436
DNA (429bp) protein (143aa)
MarR family transcriptional regulator n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S082_9RALS
Transcriptional regulator, MarR family
Tax=GWA2_Curvibacter_64_110_curated
A3-18-all-fractions_k255_1463177_27
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24491..24889
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii OR214 RepID=R0CJK1_RALPI
4-oxalocrotonate tautomerase
4-oxalocrotonate tautomerase {ECO:0000313|EMBL:AJW46880.1}; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
A3-18-all-fractions_k255_1463177_28
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25034..25681
DNA (648bp) protein (216aa)
Hypothetical membrane protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GPQ9_CUPNN
atoE1; short-chain fatty acids transporter AtoE
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
A3-18-all-fractions_k255_1463177_29
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25972..27540
DNA (1569bp) protein (523aa)
galactarate dehydratase (EC:4.2.1.42)
Galactarate dehydratase {ECO:0000313|EMBL:ABE45018.1}; EC=4.2.1.42 {ECO:0000313|EMBL:ABE45018.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
Galactarate dehydratase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q128M4_POLSJ
A3-18-all-fractions_k255_1463177_30
Pseudomonas knackmussii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(27544..28194)
DNA (651bp) protein (217aa)
Ribonuclease n=1 Tax=Pseudomonas fluorescens F113 RepID=G8PYU0_PSEFL
ribonuclease T2 family protein
Ribonuclease T2 family protein {ECO:0000313|EMBL:CDF84304.1}; TaxID=1301098 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas knackmussii (strain DSM 6978 / LMG 23759 / B13).;"
Displaying items 1-30 of 38 in total

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