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A3-18-all-fractions_k255_4597443

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_4597443_1
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1551)
DNA (1551bp) protein (517aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
peptidyl-prolyl cis-trans isomerase transmembrane protein (EC:5.2.1.8)
Putative peptidyl-prolyl cis-trans isomerase transmembrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SH74_METPP
A3-18-all-fractions_k255_4597443_2
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1812..2084)
DNA (273bp) protein (91aa)
Bacterial nucleoid protein Hbs n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SH75_METPP
nucleoid protein Hbs
Bacterial nucleoid protein Hbs {ECO:0000313|EMBL:ABM94914.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_4597443_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2320..3198)
DNA (879bp) protein (293aa)
alpha/beta hydrolase n=1 Tax=Comamonas sp. B-9 RepID=UPI0003956BE4
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADU36171.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
A3-18-all-fractions_k255_4597443_4
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3213..3779)
DNA (567bp) protein (189aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CDS55170.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CDS55170.1};; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Polaromonas sp. CF318 RepID=J3D3F6_9BURK
A3-18-all-fractions_k255_4597443_5
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3821..4294)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SH78_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM94917.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_4597443_6
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4281..6209)
DNA (1929bp) protein (643aa)
excinuclease ABC subunit C n=1 Tax=Caldimonas manganoxidans RepID=UPI0003763237
uvrC; excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_4597443_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6250..7308
DNA (1059bp) protein (353aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WP94_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71146.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_4597443_8
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7408..7962
DNA (555bp) protein (185aa)
Elongation factor P n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SH81_METPP
elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-18-all-fractions_k255_4597443_9
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8038..9981
DNA (1944bp) protein (648aa)
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; tRNA (mnm(5)s(2)U34)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=2.1.1.61 {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; FAD-dependent cmnm(5)s(2)U34 oxidoreductase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=1.5.-.- {ECO:0000255|HAMAP-Rule:MF_01102};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000382A1DF
hypothetical protein
A3-18-all-fractions_k255_4597443_10
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9988..10179)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MP73_9BURK
NODE_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96470.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
hypothetical protein
A3-18-all-fractions_k255_4597443_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10224..10901)
DNA (678bp) protein (226aa)
ribose-5-phosphate isomerase A (EC:5.3.1.6)
ribose 5-phosphate isomerase n=1 Tax=Caldimonas manganoxidans RepID=UPI000381F5D7
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_4597443_12
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10949..11989
DNA (1041bp) protein (347aa)
dihydroorotate dehydrogenase 2 (EC:1.3.98.1)
Dihydroorotate dehydrogenase (quinone) {ECO:0000255|HAMAP-Rule:MF_00225}; EC=1.3.5.2 {ECO:0000255|HAMAP-Rule:MF_00225};; DHOdehase {ECO:0000255|HAMAP-Rule:MF_00225}; Short=DHOD {ECO:0000255|HAMAP-Rule:MF_00225};; Short=DHODase {ECO:0000255|HAMAP-Rule:MF_00225};; Dihydroorotate oxidase {ECO:0000255|HAMAP-Rule:MF_00225}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
dihydroorotate dehydrogenase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003680B98
A3-18-all-fractions_k255_4597443_13
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12042..13433
DNA (1392bp) protein (464aa)
Cardiolipin synthase Cls {ECO:0000313|EMBL:AEI80249.1}; EC=2.7.8.- {ECO:0000313|EMBL:AEI80249.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
Cardiolipin synthase Cls n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GN61_CUPNN
cardiolipin synthase
A3-18-all-fractions_k255_4597443_14
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13478..14404
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AFE1_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN46470.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
A3-18-all-fractions_k255_4597443_15
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14411..15049)
DNA (639bp) protein (213aa)
Candidate succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (Succinyl CoA:3-oxoacid CoA-transferase) n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y4A8_RAMTT
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B
Candidate succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (Succinyl CoA:3-oxoacid CoA-transferase) {ECO:0000313|EMBL:AEG92573.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
A3-18-all-fractions_k255_4597443_16
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15061..15762)
DNA (702bp) protein (234aa)
3-oxoacid CoA-transferase (EC:2.8.3.5)
3-oxoacid CoA-transferase {ECO:0000313|EMBL:ABM94418.1}; EC=2.8.3.5 {ECO:0000313|EMBL:ABM94418.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
3-oxoacid CoA-transferase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFS9_METPP
A3-18-all-fractions_k255_4597443_17
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15868..16443
DNA (576bp) protein (192aa)
PAS domain S-box n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN88_9BURK
LuxR family transcriptional regulator
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_4597443_18
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16447..16866)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000373540E
thioesterase superfamily protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
A3-18-all-fractions_k255_4597443_19
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16869..17537)
DNA (669bp) protein (223aa)
UPF0502 protein Mpe_A1449 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=Y1449_METPP
UPF0502 protein Vapar_4077
UPF0502 protein E1O_13350 {ECO:0000256|HAMAP-Rule:MF_01584}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
A3-18-all-fractions_k255_4597443_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17560..18342)
DNA (783bp) protein (261aa)
short chain dehydrogenase (EC:1.-.-.-)
short-chain dehydrogenase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036BFC31
Short chain dehydrogenase {ECO:0000313|EMBL:EGJ11281.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A3-18-all-fractions_k255_4597443_21
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18426..20111
DNA (1686bp) protein (562aa)
electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1)
dehydrogenase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003732B48
Electron transfer flavoprotein-ubiquinone oxidoreductase {ECO:0000313|EMBL:KIF82324.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
A3-18-all-fractions_k255_4597443_22
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20391..21509
DNA (1119bp) protein (373aa)
Aminomethyltransferase {ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|RuleBase:RU003981};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Aminomethyltransferase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWG0_LEPCP
glycine cleavage system T protein
A3-18-all-fractions_k255_4597443_23
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21548..21922
DNA (375bp) protein (125aa)
Glycine cleavage system H protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPJ9_RUBGI
gcvH; glycine cleavage system H protein GcvH
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_4597443_24
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21927..24839
DNA (2913bp) protein (971aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
glycine dehydrogenase n=1 Tax=Caldimonas manganoxidans RepID=UPI000361C76A
glycine dehydrogenase
A3-18-all-fractions_k255_4597443_25
Burkholderia multivorans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24916..26448
DNA (1533bp) protein (511aa)
4-hydroxyacetophenone monooxygenase n=1 Tax=Burkholderia kururiensis RepID=UPI000344A7DC
Monooxygenase {ECO:0000313|EMBL:EEE02965.1}; TaxID=513051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia multivorans CGD1.;"
pyridine nucleotide-disulfide oxidoreductase family protein
A3-18-all-fractions_k255_4597443_26
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26470..27861
DNA (1392bp) protein (464aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase {ECO:0000313|EMBL:ABM94391.1}; EC=4.3.1.17 {ECO:0000313|EMBL:ABM94391.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
L-serine ammonia-lyase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFQ2_METPP
A3-18-all-fractions_k255_4597443_27
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27861..28340
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CCJ5_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ41338.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa alba B18LD.;"
A3-18-all-fractions_k255_4597443_28
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28337..29185
DNA (849bp) protein (283aa)
taurine dioxygenase (EC:1.14.11.17)
Taurine catabolism dioxygenase TauD/TfdA n=1 Tax=alpha proteobacterium BAL199 RepID=A8TN12_9PROT
Taurine catabolism dioxygenase TauD/TfdA {ECO:0000313|EMBL:EDP65960.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
A3-18-all-fractions_k255_4597443_29
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29182..30222)
DNA (1041bp) protein (347aa)
Putative dehydrogenase n=1 Tax=Polaromonas sp. CF318 RepID=J2LFN2_9BURK
Putative dehydrogenase {ECO:0000313|EMBL:EJL83958.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
putative oxidoreductase protein
A3-18-all-fractions_k255_4597443_30
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30342..31616
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Azoarcus sp. KH32C RepID=H0PVI3_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:KJA09565.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
Displaying items 1-30 of 45 in total

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