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A3-18-all-fractions_k255_5705668

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_5705668_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..1617
DNA (1617bp) protein (539aa)
General secretion pathway protein D n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHD3_9BURK
General secretion pathway protein D {ECO:0000313|EMBL:EHR69995.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
gspD; putative general secretion pathway protein D GspD
A3-18-all-fractions_k255_5705668_2
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1629..3050
DNA (1422bp) protein (474aa)
General secretory pathway protein E n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WHD2_9BURK
General secretory pathway protein E {ECO:0000313|EMBL:EHR69994.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
gspE; pili biogenesis ATPase
A3-18-all-fractions_k255_5705668_3
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3067..4281
DNA (1215bp) protein (405aa)
General secretory pathway protein F n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKK2_METPP
gspF; general secretory pathway protein F
General secretory pathway protein F {ECO:0000313|EMBL:ABM96091.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_5705668_4
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4494..5489
DNA (996bp) protein (332aa)
Lon protease {ECO:0000313|EMBL:EWS61804.1}; EC=3.4.21.53 {ECO:0000313|EMBL:EWS61804.1};; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
Putative ATPase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKK4_METPP
ATPase
A3-18-all-fractions_k255_5705668_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5490..6209)
DNA (720bp) protein (240aa)
Crp/Fnr family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003694B5E
cAMP-binding protein {ECO:0000313|EMBL:EJL78056.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
transcriptional regulator, Crp/Fnr family
A3-18-all-fractions_k255_5705668_6
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6218..7402)
DNA (1185bp) protein (395aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=Polaromonas sp. CF318 RepID=J2K9C2_9BURK
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:EJL76850.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
extracellular ligand-binding receptor
A3-18-all-fractions_k255_5705668_7
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7605..8507
DNA (903bp) protein (301aa)
5'-nucleotidase {ECO:0000313|EMBL:EIK88766.1}; EC=3.1.3.5 {ECO:0000313|EMBL:EIK88766.1};; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
5''''-nucleotidase n=1 Tax=Caldimonas manganoxidans RepID=UPI00036B0EB1
5'-nucleotidase
A3-18-all-fractions_k255_5705668_8
Ralstonia sp. A12, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8511..9143)
DNA (633bp) protein (211aa)
2-dehydro-3-deoxy-6-phosphogalactonate aldolase n=2 Tax=Ralstonia RepID=E2T4S6_9RALS
2-dehydro-3-deoxy-6-phosphogalactonate aldolase {ECO:0000313|EMBL:KHK50597.1}; TaxID=1217052 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. A12.;"
2-dehydro-3-deoxy-6-phosphogalactonate aldolase
A3-18-all-fractions_k255_5705668_9
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9124..9882)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000368FE20
cAMP-binding protein {ECO:0000313|EMBL:EJL77917.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
Crp/Fnr family transcriptional regulator
A3-18-all-fractions_k255_5705668_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10025..11962
DNA (1938bp) protein (646aa)
long-chain fatty acid--CoA ligase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003732778
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EGJ12073.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
AMP-dependent synthetase and ligase
A3-18-all-fractions_k255_5705668_11
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11959..12822
DNA (864bp) protein (288aa)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036CD0AF
branched chain amino acid ABC transporter ATP-binding protein
Candidate ABC type branched chain amino acid transport systems, ATP-binding component {ECO:0000313|EMBL:AEG94607.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
A3-18-all-fractions_k255_5705668_12
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12837..13766
DNA (930bp) protein (310aa)
Inner-membrane translocator n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y338_LEPCP
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ACB35694.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A3-18-all-fractions_k255_5705668_13
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13779..14855
DNA (1077bp) protein (359aa)
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI000364B433
inner-membrane translocator
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:EJL77913.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
A3-18-all-fractions_k255_5705668_14
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14902..16245
DNA (1344bp) protein (448aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WH91_9BURK
hypothetical protein
Tax=GWA2_Curvibacter_64_110_curated
A3-18-all-fractions_k255_5705668_15
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16276..17091
DNA (816bp) protein (272aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HM76_RUBGI
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL94113.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-18-all-fractions_k255_5705668_16
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17088..17384
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037C4B5B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EWS61806.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-18-all-fractions_k255_5705668_17
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17389..18666
DNA (1278bp) protein (426aa)
AMP-dependent synthetase n=1 Tax=Caldimonas manganoxidans RepID=UPI00035C1A2A
AMP-dependent synthetase {ECO:0000313|EMBL:KJA11883.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
phenylacetate-CoA ligase
A3-18-all-fractions_k255_5705668_18
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18772..19743
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKK7_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM96096.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_5705668_19
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19747..20190)
DNA (444bp) protein (148aa)
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-aminoacyl-tRNA deacylase {ECO:0000255|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000255|HAMAP-Rule:MF_00518};; D-tyrosyl-tRNA(Tyr) deacylase; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003726D4B
A3-18-all-fractions_k255_5705668_20
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20197..21120)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036F83F0
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EHR69946.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
cation diffusion facilitator family transporter
A3-18-all-fractions_k255_5705668_21
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21123..22343)
DNA (1221bp) protein (407aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Tyrosine--tRNA ligase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKL4_METPP
A3-18-all-fractions_k255_5705668_22
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22572..23963
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKL5_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM96104.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_5705668_23
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24040..25170
DNA (1131bp) protein (377aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Acidovorax sp. CF316 RepID=J1EG25_9BURK
anmK; anhydro-N-acetylmuramic acid kinase
A3-18-all-fractions_k255_5705668_24
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25268..25645)
DNA (378bp) protein (126aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WH80_9BURK
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
erpA; putative iron-sulfur cluster assembly accessory protein
A3-18-all-fractions_k255_5705668_25
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25678..26073)
DNA (396bp) protein (132aa)
Integral membrane protein CcmA involved in cell shape determination n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WW85_9BURK
Integral membrane protein CcmA involved in cell shape determination {ECO:0000313|EMBL:EHR69941.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_5705668_26
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26113..26808)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037D7ECC
Putative uncharacterized protein {ECO:0000313|EMBL:EHR69940.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-18-all-fractions_k255_5705668_27
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26951..27343)
DNA (393bp) protein (131aa)
30S ribosomal protein S9 n=2 Tax=Rubrivivax RepID=I0HM65_RUBGI
rpsI; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A3-18-all-fractions_k255_5705668_28
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27353..27781)
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034B2DAE
rplM; 50S ribosomal protein L13
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-18-all-fractions_k255_5705668_29
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28010..28729
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036D1A52
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_5705668_30
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28874..29440
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WW80_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR69936.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
Displaying 30 items

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