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A3-18-all-fractions_k255_6078989

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-18-all-fractions_k255_6078989_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(706..2514)
DNA (1809bp) protein (603aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ptsI; phosphoenolpyruvate-protein phosphotransferase PtsI (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU35_9BURK
A3-18-all-fractions_k255_6078989_2
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2656..3504
DNA (849bp) protein (283aa)
Ornithine-acyl[acyl carrier protein] N-acyltransferase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCJ8_METPP
ornithine-acyl[acyl carrier protein] N-acyltransferase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A3-18-all-fractions_k255_6078989_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3511..3780)
DNA (270bp) protein (90aa)
ptsH; sugar transport PTS system phosphocarrier protein HPr, PtsH (EC:2.7.11.-)
Phosphotransferase system, phosphocarrier protein HPr n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU64_9BURK
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:EGJ11882.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A3-18-all-fractions_k255_6078989_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3749..4207)
DNA (459bp) protein (153aa)
phosphotransferase system, fructose-specific component IIA (EC:2.7.1.69)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI0003645D6D
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:EHR69355.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A3-18-all-fractions_k255_6078989_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4318..4842)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000367B0B9
transmembrane protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_6078989_6
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4878..6122
DNA (1245bp) protein (415aa)
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16)
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:BAL97740.1}; EC=2.8.3.16 {ECO:0000313|EMBL:BAL97740.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXK3_RUBGI
A3-18-all-fractions_k255_6078989_7
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6122..6841
DNA (720bp) protein (240aa)
Putative esterase n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SB18_GEOOG
Putative esterase {ECO:0000313|EMBL:KDB53581.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
putative esterase
A3-18-all-fractions_k255_6078989_8
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7018..8139
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCJ3_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93282.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_6078989_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8147..9505)
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI0003740D1C
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-18-all-fractions_k255_6078989_10
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9594..10103
DNA (510bp) protein (170aa)
Putative membrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCJ1_METPP
hypothetical protein
Thiol-disulfide oxidoreductase ResA {ECO:0000313|EMBL:EWS61272.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-18-all-fractions_k255_6078989_11
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10119..11018)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SEK6_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM93995.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-18-all-fractions_k255_6078989_12
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11066..12031)
DNA (966bp) protein (322aa)
lipoyl synthase (EC:2.8.1.-)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Lipoyl synthase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCI9_METPP
A3-18-all-fractions_k255_6078989_13
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12042..12698)
DNA (657bp) protein (219aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
Octanoyltransferase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XX29_LEPCP
lipoate-protein ligase B
A3-18-all-fractions_k255_6078989_14
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12710..12991)
DNA (282bp) protein (94aa)
UPF0250 protein RBXJA2T_16237 n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU70_9BURK
UPF0250 protein Y694_00791 {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein
A3-18-all-fractions_k255_6078989_15
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13022..13897)
DNA (876bp) protein (292aa)
putative aminotransferase (EC:2.6.1.-)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00038076D4
Branched subunit Amino acid: 2-keto-4-methylthiobutyrate aminotransferase {ECO:0000313|EMBL:EGJ11889.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A3-18-all-fractions_k255_6078989_16
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13926..15074)
DNA (1149bp) protein (383aa)
dacC; D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase DacC {ECO:0000313|EMBL:BAL97746.1}; EC=3.4.16.4 {ECO:0000313|EMBL:BAL97746.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
D-alanyl-D-alanine carboxypeptidase DacC n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXK9_RUBGI
A3-18-all-fractions_k255_6078989_17
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15133..15756)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCI3_METPP
Putative hydrolase of the alpha/beta-hydrolase fold protein {ECO:0000313|EMBL:EWS61420.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
hypothetical protein
A3-18-all-fractions_k255_6078989_18
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15753..16082)
DNA (330bp) protein (110aa)
Ferredoxin-like protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XYQ0_LEPCP
Ferredoxin-like protein {ECO:0000313|EMBL:KDB53046.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
ferredoxin-like protein
A3-18-all-fractions_k255_6078989_19
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16140..17249)
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000373DCCC
VanZ family protein {ECO:0000313|EMBL:EGJ11893.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A3-18-all-fractions_k255_6078989_20
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17264..17683)
DNA (420bp) protein (140aa)
Putative transmembrane protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCI0_METPP
transmembrane protein
Putative membrane protein {ECO:0000313|EMBL:EWS61423.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-18-all-fractions_k255_6078989_21
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17746..19119
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NYQ1_AROAE
esterase
Uncharacterized protein {ECO:0000313|EMBL:CAI09813.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
A3-18-all-fractions_k255_6078989_22
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19396..20394
DNA (999bp) protein (333aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ63_9BURK
hemB; Delta-aminolevulinic acid dehydratase
A3-18-all-fractions_k255_6078989_23
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20406..21458
DNA (1053bp) protein (351aa)
Transport protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCH8_METPP
Magnesium transport protein CorA {ECO:0000313|EMBL:EWS61425.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
corA; transport protein
A3-18-all-fractions_k255_6078989_24
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21461..22384
DNA (924bp) protein (308aa)
permease id=5082944 bin=GWF1_Burkholderiales_GWF1_66_17 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
permease
Tax=BJP_08E140C01_Burkholderiales_65_30
A3-18-all-fractions_k255_6078989_25
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22338..22790)
DNA (453bp) protein (151aa)
Endoribonuclease YbeY {ECO:0000255|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00009};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000361EBCE
hypothetical protein
A3-18-all-fractions_k255_6078989_26
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22802..23779)
DNA (978bp) protein (326aa)
phosphate starvation protein PhoH n=1 Tax=Caldimonas manganoxidans RepID=UPI00036D36EC
PhoH-like protein {ECO:0000313|EMBL:EWS61039.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
phoH-like protein
A3-18-all-fractions_k255_6078989_27
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23785..25734
DNA (1950bp) protein (650aa)
Redox sensor histidine kinase response regulator DevS {ECO:0000313|EMBL:EWS54344.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EWS54344.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXL9_RUBGI
sensor signal transduction histidine kinase
A3-18-all-fractions_k255_6078989_28
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25818..26471
DNA (654bp) protein (218aa)
Response regulator n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKV1_METPP
response regulator
Transcriptional regulatory protein LiaR {ECO:0000313|EMBL:EWS54343.1}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
A3-18-all-fractions_k255_6078989_29
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26497..27069
DNA (573bp) protein (191aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000255|HAMAP-Rule:MF_00031}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00031};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=RUVA_LEPCP
ruvA; Holliday junction DNA helicase RuvA
A3-18-all-fractions_k255_6078989_30
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27468..27935)
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00036A65AA
Uncharacterized protein {ECO:0000313|EMBL:EJL88646.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
copper metallochaperone
Displaying items 1-30 of 34 in total

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