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H1-16-all-fractions_k255_5794813

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-16-all-fractions_k255_5794813_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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1..2502
-----------------
DNA (2502bp)
protein (834aa)
UvrABC system protein A n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCJ2_9BACT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
excinuclease ABC subunit A
H1-16-all-fractions_k255_5794813_2
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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2624..3589
-----------------
DNA (966bp)
protein (322aa)
Putative uncharacterized protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJB8_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ABV27367.1}; TaxID=458033 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum.;"
hypothetical protein
H1-16-all-fractions_k255_5794813_3
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3731..6076
-----------------
DNA (2346bp)
protein (782aa)
TonB-dependent siderophore receptor n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IUX4_9GAMM
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EGW21659.1}; Flags: Precursor;; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
TonB-dependent siderophore receptor
H1-16-all-fractions_k255_5794813_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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6224..6604
-----------------
DNA (381bp)
protein (127aa)
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:CDM65336.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
transcriptional regulators, TraR/DksA family id=14626910 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
H1-16-all-fractions_k255_5794813_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(6982..7905)
-----------------
DNA (924bp)
protein (308aa)
Tyrosine recombinase XerC n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPQ9_9BACT
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
site-specific recombinase XerD
H1-16-all-fractions_k255_5794813_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(8019..9158)
-----------------
DNA (1140bp)
protein (380aa)
von Willebrand factor type A n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR0_9BACT
Mg-chelatase subunit ChlD {ECO:0000313|EMBL:CDM66095.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
von Willebrand factor type A domain-containing protein
H1-16-all-fractions_k255_5794813_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(9194..10606)
-----------------
DNA (1413bp)
protein (471aa)
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO {ECO:0000256|HAMAP-Rule:MF_01037}; EC=2.1.1.74 {ECO:0000256|HAMAP-Rule:MF_01037, ECO:0000256|SAAS:SAAS00089759};; Folate-dependent tRNA (uracil-5-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; Folate-dependent tRNA(M-5-U54)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01037}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LDA1_CHLTF
tRNA:m(5)U-54 methyltransferase
H1-16-all-fractions_k255_5794813_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10650..12302)
-----------------
DNA (1653bp)
protein (551aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJN3_CHLTF
Uncharacterized protein {ECO:0000313|EMBL:CDM66093.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H1-16-all-fractions_k255_5794813_9
unknown

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comp(12490..12666)
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

H1-16-all-fractions_k255_5794813_10
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12708..13277)
-----------------
DNA (570bp)
protein (190aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
hypothetical protein n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI00037417F8
H1-16-all-fractions_k255_5794813_11
bacterium UASB270, Bacteria

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13517..14554
-----------------
DNA (1038bp)
protein (346aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B6C0AB
Uncharacterized protein {ECO:0000313|EMBL:GAK60030.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
secreted protein
H1-16-all-fractions_k255_5794813_12
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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14646..15113
-----------------
DNA (468bp)
protein (156aa)
hypothetical protein n=1 Tax=Saccharibacillus kuerlensis RepID=UPI0003786747
mscL; large-conductance mechanosensitive channel
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
H1-16-all-fractions_k255_5794813_13
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(15204..15827)
-----------------
DNA (624bp)
protein (208aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor id=3788297 bin=GWC2_TM7_48_9 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
H1-16-all-fractions_k255_5794813_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16197..16685
-----------------
DNA (489bp)
protein (163aa)
Sigma-54 interacting regulator {ECO:0000313|EMBL:CDM66090.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H1-16-all-fractions_k255_5794813_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

17004..17453
-----------------
DNA (450bp)
protein (150aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Acidovorax sp. CF316 RepID=J0U3E8_9BURK
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:CDM65276.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
putative Hpt sensor hybrid histidine kinase
H1-16-all-fractions_k255_5794813_16
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(17690..18454)
-----------------
DNA (765bp)
protein (255aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SA9_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:CDM65337.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H1-16-all-fractions_k255_5794813_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18547..19284)
-----------------
DNA (738bp)
protein (246aa)
Uncharacterized protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9K9_GEOBB
Uncharacterized protein {ECO:0000313|EMBL:CDM65337.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
H1-16-all-fractions_k255_5794813_18
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19472..19918)
-----------------
DNA (447bp)
protein (149aa)
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:AKF10339.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
H1-16-all-fractions_k255_5794813_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

20106..20351
-----------------
DNA (246bp)
protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM66671.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
H1-16-all-fractions_k255_5794813_20
unknown

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20497..21963
-----------------
DNA (1467bp)
protein (489aa)

This feature has no annotations

H1-16-all-fractions_k255_5794813_21
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(22059..22736)
-----------------
DNA (678bp)
protein (226aa)
Peroxiredoxin {ECO:0000313|EMBL:CDM66672.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Alkyl hydroperoxide reductase id=4301400 bin=GWC2_Ignavibacteria_38_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
alkyl hydroperoxide reductase
H1-16-all-fractions_k255_5794813_22
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(22787..25387)
-----------------
DNA (2601bp)
protein (867aa)
serine/threonine protein kinase (EC:2.7.11.1)
Serine/threonine protein kinase {ECO:0000313|EMBL:AEP11813.1}; EC=2.7.11.1 {ECO:0000313|EMBL:AEP11813.1};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Serine/threonine protein kinase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH71_CHLTF
H1-16-all-fractions_k255_5794813_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(25663..26814)
-----------------
DNA (1152bp)
protein (384aa)
Pilus retraction protein PilT n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFB6_CHLTF
Pilus retraction protein PilT {ECO:0000313|EMBL:CDM64249.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
pilus retraction protein PilT
H1-16-all-fractions_k255_5794813_24
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27091..27489
-----------------
DNA (399bp)
protein (133aa)
Uncharacterized protein n=1 Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1LY19_METRJ
protein of unassigned function
Protein of unassigned function {ECO:0000313|EMBL:AIQ92113.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
H1-16-all-fractions_k255_5794813_25
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(27575..28672)
-----------------
DNA (1098bp)
protein (366aa)
Branched chain amino acid aminotransferase apoenzyme {ECO:0000313|EMBL:CDM64250.1}; EC=2.6.1.42 {ECO:0000313|EMBL:CDM64250.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
branched chain amino acid aminotransferase (EC:2.6.1.42)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037CD169
H1-16-all-fractions_k255_5794813_26
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

29025..30182
-----------------
DNA (1158bp)
protein (386aa)
Zn-dependent dipeptidase, microsomal dipeptidase {ECO:0000313|EMBL:CDM64251.1}; EC=3.4.13.19 {ECO:0000313|EMBL:CDM64251.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
membrane dipeptidase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B6F708
M19 family peptidase
H1-16-all-fractions_k255_5794813_27
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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30179..31078
-----------------
DNA (900bp)
protein (300aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Probable endonuclease 4 n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NQX7_GRAMM
apurinic endonuclease Apn1
H1-16-all-fractions_k255_5794813_28
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31080..31340
-----------------
DNA (261bp)
protein (87aa)
Transcriptional regulator, GntR family n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R910_SPISS
GntR family transcriptional regulator {ECO:0000313|EMBL:EXM38980.1}; TaxID=1341156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus SY3.;"
GntR family transcriptional regulator
H1-16-all-fractions_k255_5794813_29
Bacillus sp. B14905, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(31221..31871)
-----------------
DNA (651bp)
protein (217aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus vortex V453 RepID=E5YRV3_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EAZ85390.1}; TaxID=388400 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. B14905.;"
H1-16-all-fractions_k255_5794813_30
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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32051..34708
-----------------
DNA (2658bp)
protein (886aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=SYL_ALKEH
Displaying items 1-30 of 39 in total

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