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H1-18-all-fractions_k255_4047476

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_4047476_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

H1-18-all-fractions_k255_4047476_2
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(329..532)
DNA (204bp) protein (68aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=Rhodopirellula europaea SH398 RepID=M5RVF3_9PLAN
Retron-type reverse transcriptase {ECO:0000313|EMBL:KJE22162.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
RNA-directed DNA polymerase
H1-18-all-fractions_k255_4047476_3
unknown

Not on your lists

comp(827..952)
DNA (126bp) protein (42aa)

This feature has no annotations

H1-18-all-fractions_k255_4047476_4
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1369..2259
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003658F23
Transposase IS110 {ECO:0000313|EMBL:KGN40792.1}; TaxID=1385519 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
Putative transposase y4pF/y4sB
H1-18-all-fractions_k255_4047476_5
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2232..2528
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI0003658F23
Uncharacterized protein {ECO:0000313|EMBL:GAJ81486.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
transposase IS116/IS110/IS902 family protein
H1-18-all-fractions_k255_4047476_6
unknown

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comp(2603..2725)
DNA (123bp) protein (41aa)

This feature has no annotations

H1-18-all-fractions_k255_4047476_7
Gordonia phage GTE2, Caudovirales, Viruses

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3335..3619
DNA (285bp) protein (95aa)
Terminase large subunit n=1 Tax=Gordonia phage GTE2 RepID=F8S0R3_9CAUD
Terminase large subunit {ECO:0000313|EMBL:ADX42588.1}; TaxID=981323 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Gordonia phage GTE2.;"
H1-18-all-fractions_k255_4047476_8
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4316..4924
DNA (609bp) protein (203aa)
transcriptional regulator n=1 Tax=Amycolatopsis balhimycina RepID=UPI00035C48B6
Response regulator {ECO:0000313|EMBL:EWC59900.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
nasT; two-component system response regulator
H1-18-all-fractions_k255_4047476_9
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4917..6830)
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K3W497_SACES
Vegetative cell wall protein gp1 {ECO:0000313|EMBL:EWM12488.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
H1-18-all-fractions_k255_4047476_10
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7119..8354
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036D5DB3
Branched-chain amino acid ABC transporter, amino acid-binding protein {ECO:0000313|EMBL:EWC59903.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
extracellular ligand-binding receptor
H1-18-all-fractions_k255_4047476_11
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8440..9354
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000360A87A
High-affinity branched-chain amino acid transport system permease protein LivH {ECO:0000313|EMBL:EWC59904.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
amino acid/amide ABC transporter membrane protein 1, HAAT family
H1-18-all-fractions_k255_4047476_12
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9351..11120
DNA (1770bp) protein (590aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003810FAC
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:EWC59905.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
putative membrane protein
H1-18-all-fractions_k255_4047476_13
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11117..12007
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003700C2E
Branched-chain amino acid transporter ATP-binding protein {ECO:0000313|EMBL:EWM12484.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
High-affinity branched-chain amino acid transport ATP-binding protein LivG
H1-18-all-fractions_k255_4047476_14
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12004..12717
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003666370
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:KJK45236.1}; TaxID=68170 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
High-affinity branched-chain amino acid transport ATP-binding protein LivF
H1-18-all-fractions_k255_4047476_15
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12767..13192)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003801952
ComA operon protein 2 {ECO:0000313|EMBL:EWC59909.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
thioesterase superfamily protein
H1-18-all-fractions_k255_4047476_16
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13259..15985
DNA (2727bp) protein (909aa)
DNA polymerase I {ECO:0000313|EMBL:EWC59911.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EWC59911.1};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000366F9A3
polA; DNA polymerase I
H1-18-all-fractions_k255_4047476_17
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16761..17135
DNA (375bp) protein (125aa)
AraC family transcriptional regulator n=1 Tax=Amycolatopsis methanolica RepID=UPI00037AB2D4
ptlR; putative AraC family transcriptional regulator
Putative AraC family transcriptional regulator {ECO:0000313|EMBL:AIJ23051.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_4047476_18
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17146..17580
DNA (435bp) protein (145aa)
glyoxalase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262655C
Putative lyase {ECO:0000313|EMBL:EWC59913.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
lyase
H1-18-all-fractions_k255_4047476_19
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17633..18184
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K8R1_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH33932.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
H1-18-all-fractions_k255_4047476_20
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18217..19425)
DNA (1209bp) protein (403aa)
Uncharacterized protein {ECO:0000313|EMBL:KKD05857.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
H1-18-all-fractions_k255_4047476_21
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19418..19909)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Longispora albida RepID=UPI00037B0A1F
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:EWM67418.1}; TaxID=457406 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
RNA polymerase sigma factor sigX
H1-18-all-fractions_k255_4047476_22
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19983..20906)
DNA (924bp) protein (308aa)
GCN5-related N-acetyltransferase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WB51_ACTMD
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACU39342.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
H1-18-all-fractions_k255_4047476_23
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20906..21769)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036C66E8
SAM-dependent methyltransferase {ECO:0000313|EMBL:EWC59923.1}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Methyltransferase type 11
H1-18-all-fractions_k255_4047476_24
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


22030..22857
DNA (828bp) protein (276aa)
30S ribosomal protein S1 n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WB49_ACTMD
30S ribosomal protein S1 {ECO:0000313|EMBL:EWM12473.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
rpsA; 30S ribosomal protein S1
Displaying 24 items

View Taxonomy