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H1-18-all-fractions_k255_4928131

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
H1-18-all-fractions_k255_4928131_1
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..598
DNA (597bp) protein (199aa)
UvrABC system protein A n=1 Tax=Streptomyces sp. AA4 RepID=D9UZK7_9ACTO
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
uvrA; UvrABC system protein A
H1-18-all-fractions_k255_4928131_2
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(793..1668)
DNA (876bp) protein (292aa)
Possible protochlorophyllide reductase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0S708_RHOSR
protochlorophyllide reductase
Possible protochlorophyllide reductase {ECO:0000313|EMBL:ABG96678.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
H1-18-all-fractions_k255_4928131_3
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1700..2146
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Amycolatopsis methanolica RepID=UPI000372A6F2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ22747.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
H1-18-all-fractions_k255_4928131_4
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2274..3251
DNA (978bp) protein (326aa)
Transcriptional regulator, AraC family protein n=1 Tax=Pseudomonas denitrificans ATCC 13867 RepID=M4WU62_PSEDE
Transcriptional regulator, AraC family protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
H1-18-all-fractions_k255_4928131_5
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3441..3761)
DNA (321bp) protein (107aa)
ethyl tert-butyl ether degradation protein EthD n=1 Tax=Nocardia sp. BMG111209 RepID=UPI00035E3A2B
ethyl tert-butyl ether degradation EthD
Ethyl tert-butyl ether degradation EthD {ECO:0000313|EMBL:ACU73140.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
H1-18-all-fractions_k255_4928131_6
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4007..4978
DNA (972bp) protein (324aa)
Transcriptional regulator, AraC family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QI96_CATAD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACU73141.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
H1-18-all-fractions_k255_4928131_7
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4991..5554)
DNA (564bp) protein (188aa)
Transcriptional regulator, tetR family n=1 Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MYF5_SACVD
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:AJK55985.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
H1-18-all-fractions_k255_4928131_8
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5591..6058
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI000373E2E9
Uncharacterized protein {ECO:0000313|EMBL:KHD73177.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
pyridoxamine 5'-phosphate oxidase-like protein
H1-18-all-fractions_k255_4928131_9
Amycolatopsis japonica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6078..7442)
DNA (1365bp) protein (455aa)
C4-dicarboxylate ABC transporter n=1 Tax=Amycolatopsis nigrescens RepID=UPI00035E93A5
Na+/H+ dicarboxylate symporter
Na+/H+ dicarboxylate symporter {ECO:0000313|EMBL:AIG75685.1}; TaxID=208439 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis japonica.;"
H1-18-all-fractions_k255_4928131_10
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7516..9141
DNA (1626bp) protein (542aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00035E55FA
two-component system histidine kinase
H1-18-all-fractions_k255_4928131_11
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9138..9812
DNA (675bp) protein (225aa)
chemotaxis protein CheY n=1 Tax=Amycolatopsis nigrescens RepID=UPI00037F8BF8
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=882082 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
response regulator of citrate/malate metabolism
H1-18-all-fractions_k255_4928131_12
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10189..10659
DNA (471bp) protein (157aa)
translation initiation factor IF-3 n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237A246
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
H1-18-all-fractions_k255_4928131_13
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10736..10930
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Actinokineospora enzanensis RepID=UPI000361BE20
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
H1-18-all-fractions_k255_4928131_14
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


10993..11367
DNA (375bp) protein (125aa)
50S ribosomal protein L20 n=1 Tax=Actinokineospora enzanensis RepID=UPI00037085D4
hypothetical protein
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
H1-18-all-fractions_k255_4928131_15
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11388..12203
DNA (816bp) protein (272aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WA99_ACTMD
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:ACU39288.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
H1-18-all-fractions_k255_4928131_16
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12213..12605
DNA (393bp) protein (131aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FYK6_AMYMS
Uncharacterized protein {ECO:0000313|EMBL:KDN21690.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
H1-18-all-fractions_k255_4928131_17
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


12707..13774
DNA (1068bp) protein (356aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
pheS; Phenylalanyl-tRNA synthetase alpha chain (EC:6.1.1.20)
phenylalanyl-tRNA synthetase subunit alpha n=1 Tax=Actinokineospora enzanensis RepID=UPI0003701DC2
H1-18-all-fractions_k255_4928131_18
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


13812..16325
DNA (2514bp) protein (838aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003720889
pheT; phenylalanyl-tRNA synthetase beta chain
H1-18-all-fractions_k255_4928131_19
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16803..17588)
DNA (786bp) protein (262aa)
aminoglycoside N(3')-acetyltransferase (EC:2.3.1.81)
Aminoglycoside N(3')-acetyltransferase {ECO:0000313|EMBL:ADH68443.1}; EC=2.3.1.81 {ECO:0000313|EMBL:ADH68443.1};; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
aminoglycoside N(3'''')-acetyltransferase n=1 Tax=Nocardiopsis ganjiahuensis RepID=UPI000348D6C7
H1-18-all-fractions_k255_4928131_20
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17609..18295)
DNA (687bp) protein (229aa)
DNA alkylation repair protein n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI0003711AE6
DNA alkylation repair enzyme {ECO:0000313|EMBL:EMD24438.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
DNA alkylation repair protein
H1-18-all-fractions_k255_4928131_21
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18768..20366
DNA (1599bp) protein (533aa)
peptidase n=1 Tax=Amycolatopsis balhimycina RepID=UPI00037C1B5D
Peptidase {ECO:0000313|EMBL:KDN21694.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
peptidase
H1-18-all-fractions_k255_4928131_22
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20465..21481
DNA (1017bp) protein (339aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Actinokineospora enzanensis RepID=UPI00036E2560
H1-18-all-fractions_k255_4928131_23
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21478..22635
DNA (1158bp) protein (386aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003769A6C
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
H1-18-all-fractions_k255_4928131_24
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22632..23516
DNA (885bp) protein (295aa)
argB; acetylglutamate kinase (EC:2.7.2.8)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082, ECO:0000256|SAAS:SAAS00245383};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
Acetylglutamate kinase n=2 Tax=Saccharopolyspora erythraea RepID=ARGB_SACEN
H1-18-all-fractions_k255_4928131_25
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23513..24700
DNA (1188bp) protein (396aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
Acetylornithine aminotransferase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1I4N8_9PSEU
hypothetical protein
H1-18-all-fractions_k255_4928131_26
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24697..25614
DNA (918bp) protein (306aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174};; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
ornithine carbamoyltransferase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628CF6
hypothetical protein
H1-18-all-fractions_k255_4928131_27
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25611..26123
DNA (513bp) protein (171aa)
Arginine repressor n=1 Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TAW5_AMYOR
argR; Arginine repressor
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1284240 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
H1-18-all-fractions_k255_4928131_28
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26116..26718
DNA (603bp) protein (201aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=909613 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
argininosuccinate synthase n=1 Tax=Actinokineospora enzanensis RepID=UPI00036BBAF3
hypothetical protein
Displaying 28 items

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